RetrogeneDB ID: | retro_mluc_2088 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430022:1830550..1830792(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSMLUG00000013244 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 72.41 % |
Parental protein coverage: | 93.48 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GQGQKVQKVMVQPINLIFR-YLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQ |
GQGQ.VQK..VQPINLI.R..LQN.S.I.VWL.EQVN...E....GFDEYMNL.LDDAEE.H.KTKSRKQ | |
Retrocopy | GQGQNVQKGRVQPINLICR<TLQNSSPIWVWL*EQVNLQME----GFDEYMNLILDDAEEVHFKTKSRKQ |
Parental | LGRIMLKGDNITLLQSV |
LG.I.LKGD.I.LLQSV | |
Retrocopy | LGQIILKGD-IALLQSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |