RetrogeneDB ID: | retro_ggor_91 | ||
Retrocopylocation | Organism: | Gorilla (Gorilla gorilla) | |
Coordinates: | 9:6830506..6830785(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSGGOG00000028250 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ENSG00000182004 | ||
Ensembl ID: | ENSGGOG00000000755 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 94.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKS |
MAY.GQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVN..IEGCIIGFDEYMNLVLDDAEEIHSKTKS | |
Retrocopy | MAYSGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNLQIEGCIIGFDEYMNLVLDDAEEIHSKTKS |
Parental | RKQLGRIMLKGDNITLLQSVSN |
RKQLG.IMLKGDN.TLLQSVSN | |
Retrocopy | RKQLGWIMLKGDNSTLLQSVSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Library | Retrocopy expression | Parental gene expression |
---|---|---|
SRP007412_brain_prefrontal_cortex | 0 .29 RPM | 9 .30 RPM |
SRP007412_cerebellum | 0 .35 RPM | 10 .36 RPM |
SRP007412_heart | 0 .19 RPM | 3 .78 RPM |
SRP007412_kidney | 0 .61 RPM | 16 .85 RPM |
SRP007412_liver | 0 .55 RPM | 13 .16 RPM |
SRP007412_testis | 1 .45 RPM | 18 .96 RPM |
Species | RetrogeneDB ID |
---|---|
Homo sapiens | retro_hsap_4228 |
Pan troglodytes | retro_ptro_2872 |
Pongo abelii | retro_pabe_20 |