RetrogeneDB - Parental gene ENSDNOG00000004490 details

                            
>ENSDNOG00000004490
ATGGCTTACCGTGGCCAGGGCCAAAAAGTGCAGAAGGTGATGGTGCAGCCCATCAACCTCATCTTCAGATATTTGCAAAA

TAGATCCCGGATTCAGGTGTGGCTCTATGAGCAAGTAAATATGCGGATAGAAGGGTGTATTATTGGTTTTGATGAGTACA

TGAACCTCGTATTAGATGATGCAGAAGAAATTCATTCTAAAACAAAGTCAAGAAAACAACTGGGTCGGATCATGCTAAAA

GGAGATAATATTACTCTGCTACAAAGTGTTTCCAACTAG

Library	Parental gene expression (RPM)
SRP012922_ascending_colon	23 .92 RPM
SRP012922_cerebellum	12 .51 RPM
SRP012922_heart	8 .59 RPM
SRP012922_kidney	9 .31 RPM
SRP012922_liver	7 .43 RPM
SRP012922_lung	15 .27 RPM
SRP012922_quadricep_muscle	8 .13 RPM
SRP012922_spleen	24 .15 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000000882	possible_ortholog	8 retrogenes	retro_amel_1112, retro_amel_1206, retro_amel_1211, retro_amel_1293, retro_amel_1517, retro_amel_1530, retro_amel_185, retro_amel_412,
Choloepus hoffmanni	ENSCHOG00000009158	possible_ortholog	6 retrogenes	retro_chof_139, retro_chof_1870, retro_chof_1897, retro_chof_1981, retro_chof_2652, retro_chof_450,
Callithrix jacchus	ENSCJAG00000006735	possible_ortholog	1 retrogene	retro_cjac_3163,
Erinaceus europaeus	ENSEEUG00000006187	possible_ortholog	6 retrogenes	retro_eeur_339, retro_eeur_497, retro_eeur_579, retro_eeur_613, retro_eeur_85, retro_eeur_92,
Echinops telfairi	ENSETEG00000014015	possible_ortholog	24 retrogenes	retro_etel_1136, retro_etel_1244, retro_etel_138, retro_etel_1443, retro_etel_1530, retro_etel_1636, retro_etel_1739, retro_etel_1781, retro_etel_1947, retro_etel_2143, retro_etel_234, retro_etel_258, retro_etel_310, retro_etel_377, retro_etel_466, retro_etel_546, retro_etel_56, retro_etel_579, retro_etel_581, retro_etel_582, retro_etel_76, retro_etel_776, retro_etel_799, retro_etel_80,
Felis catus	ENSFCAG00000000873	possible_ortholog	2 retrogenes	retro_fcat_1836, retro_fcat_554,
Homo sapiens	ENSG00000182004	possible_ortholog	10 retrogenes	retro_hsap_130, retro_hsap_1668, retro_hsap_2022, retro_hsap_2073, retro_hsap_2287, retro_hsap_3262, retro_hsap_4228, retro_hsap_4660, retro_hsap_516, retro_hsap_576,
Gorilla gorilla	ENSGGOG00000000755	possible_ortholog	7 retrogenes	retro_ggor_1462, retro_ggor_1626, retro_ggor_1700, retro_ggor_2221, retro_ggor_228, retro_ggor_2892, retro_ggor_91,
Loxodonta africana	ENSLAFG00000009349	ortholog_one2one	3 retrogenes	retro_lafr_796, retro_lafr_814, retro_lafr_873,
Macropus eugenii	ENSMEUG00000015262	possible_ortholog	1 retrogene	retro_meug_378,
Microcebus murinus	ENSMICG00000015537	possible_ortholog	3 retrogenes	retro_mmur_1406, retro_mmur_453, retro_mmur_58,
Myotis lucifugus	ENSMLUG00000013244	possible_ortholog	8 retrogenes	retro_mluc_1639, retro_mluc_1650, retro_mluc_1994, retro_mluc_2045, retro_mluc_2088, retro_mluc_2326, retro_mluc_85, retro_mluc_919,
Macaca mulatta	ENSMMUG00000031372	possible_ortholog	8 retrogenes	retro_mmul_1039, retro_mmul_1258, retro_mmul_1576, retro_mmul_1790, retro_mmul_1820, retro_mmul_2054, retro_mmul_2480, retro_mmul_427,
Monodelphis domestica	ENSMODG00000028394	possible_ortholog	3 retrogenes	retro_mdom_1164, retro_mdom_1790, retro_mdom_1865,
Mustela putorius furo	ENSMPUG00000011642	possible_ortholog	7 retrogenes	retro_mputfur_1078, retro_mputfur_1527, retro_mputfur_1634, retro_mputfur_53, retro_mputfur_638, retro_mputfur_729, retro_mputfur_949,
Mus musculus	ENSMUSG00000090553	possible_ortholog	10 retrogenes	retro_mmus_1527, retro_mmus_1597, retro_mmus_1704, retro_mmus_2090, retro_mmus_2788, retro_mmus_2953, retro_mmus_296, retro_mmus_3001, retro_mmus_3682, retro_mmus_898,
Otolemur garnettii	ENSOGAG00000004309	possible_ortholog	12 retrogenes	retro_ogar_2249, retro_ogar_2543, retro_ogar_2619, retro_ogar_2917, retro_ogar_3031, retro_ogar_3279, retro_ogar_748, retro_ogar_749, retro_ogar_750, retro_ogar_773, retro_ogar_774, retro_ogar_947,
Ochotona princeps	ENSOPRG00000015415	ortholog_one2one	11 retrogenes	retro_opri_120, retro_opri_1215, retro_opri_314, retro_opri_359, retro_opri_450, retro_opri_453, retro_opri_580, retro_opri_601, retro_opri_613, retro_opri_786, retro_opri_856,
Pongo abelii	ENSPPYG00000000326	possible_ortholog	8 retrogenes	retro_pabe_1375, retro_pabe_20, retro_pabe_2023, retro_pabe_228, retro_pabe_3015, retro_pabe_3620, retro_pabe_56, retro_pabe_610,
Pan troglodytes	ENSPTRG00000030224	possible_ortholog	11 retrogenes	retro_ptro_1131, retro_ptro_134, retro_ptro_1345, retro_ptro_1346, retro_ptro_1526, retro_ptro_1620, retro_ptro_2206, retro_ptro_2872, retro_ptro_3096, retro_ptro_385, retro_ptro_426,
Sorex araneus	ENSSARG00000003311	ortholog_one2one	9 retrogenes	retro_sara_171, retro_sara_173, retro_sara_183, retro_sara_214, retro_sara_219, retro_sara_37, retro_sara_664, retro_sara_697, retro_sara_750,
Sarcophilus harrisii	ENSSHAG00000002978	possible_ortholog	1 retrogene	retro_shar_357,
Sus scrofa	ENSSSCG00000023562	possible_ortholog	3 retrogenes	retro_sscr_1159, retro_sscr_172, retro_sscr_606,
Vicugna pacos	ENSVPAG00000011162	possible_ortholog	2 retrogenes	retro_vpac_469, retro_vpac_477,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_dnov_93	89.13	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_dnov_122	91.21	98.91	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_dnov_163	78.72	100.00	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_dnov_191	87.69	70.65	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_dnov_360	98.91	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_dnov_414	92.31	97.83	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_dnov_513	72.50	86.96	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_dnov_579	89.13	98.91	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_dnov_796	93.48	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_dnov_828	66.25	85.87	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_dnov_898	76.81	73.91	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_dnov_900	94.19	93.48	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_dnov_902	79.35	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_dnov_967	67.53	81.52	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_dnov_983	68.00	54.35	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_dnov_1009	72.86	73.91	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_dnov_1141	68.06	76.09	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_dnov_1223	76.81	75.00	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_dnov_1312	75.41	65.22	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_dnov_1314	76.39	76.09	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_dnov_1362	82.35	89.13	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_dnov_1438	82.19	78.26	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_dnov_2398	71.43	73.91	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_dnov_2671	66.67	76.09	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSDNOG00000004490 retrocopies

Parental gene:	ENSDNOG00000004490
Aliases:	None
Description:	None
Organism:	*Armadillo (Dasypus novemcinctus)*
Coordinates:	GeneScaffold_2453:150330..154586(+)

Parental gene:

ENSDNOG00000004490