RetrogeneDB ID: | retro_mgal_6 | ||
Retrocopylocation | Organism: | Turkey (Meleagris gallopavo) | |
Coordinates: | 23:1287920..1289051(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMGAG00000015755 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | MGA.4402 | ||
Ensembl ID: | ENSMGAG00000003960 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 61.46 % |
Parental protein coverage: | 98.93 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | DIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEH |
D..A...DNGSG.CKAG.AGD..PR.V..SIVGR.R....M.G.G.K..YVG.EAQSKRGILTL.YPI.H | |
Retrocopy | DVPAVIFDNGSGLCKAGIAGDGGPRSVISSIVGRSRVKSAMLGAGMKEYYVGEEAQSKRGILTLNYPIDH |
Parental | GIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY |
GIVT.WDDME.IW.H....ELRV...E.PVLLTE.PLNP..NRE.MT.IMFE.F..PAMY.A.QA.L.LY | |
Retrocopy | GIVTSWDDMERIWRHVYDYELRVKASERPVLLTEPPLNPLQNRERMTEIMFEGFMVPAMYIAVQASLALY |
Parental | ASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK |
AS.RTTGIV.DSGDGVTHTVPIYEGY.LPHA..RLD.AGRD.T.Y.M..L.E.GYSF..TAEREIV.DIK | |
Retrocopy | ASARTTGIVLDSGDGVTHTVPIYEGYCLPHAVSRLDIAGRDITEYFMRLLLESGYSFVSTAEREIVKDIK |
Parental | EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIM |
EKLCYVALD...EM...AS.....K.Y.LPD...I.IG...FR.PE.LF.P...G.E..G.H...FNS.. | |
Retrocopy | EKLCYVALDPTLEM--KASPEEIMKEYRLPDSNIIQIGSQLFRAPETLFVPGNIGIEAPGVHKMLFNSVT |
Parental | KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ |
KCD.D.R.DLY.N..LSGG.T..PG...R..KE.....P..M..KI.APPERKYSVW.G.SIL..L..F. | |
Retrocopy | KCDIDVRRDLYGNVLLSGGSTLFPGLEERILKELHLQVPVGMLVKIVAPPERKYSVWVGASILSCLTSFK |
Parental | QMWISKQEYDESGPSIVHRKC |
.MW.....Y...G....HRKC | |
Retrocopy | SMWVTVRDYSDFGAAVIHRKC |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | RetrogeneDB ID |
---|---|
Gallus gallus | retro_ggal_4 |