RetrogeneDB ID: | retro_mputfur_787 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL896947.1:9241081..9241457(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | H3F3A | ||
Ensembl ID: | ENSMPUG00000013811 | ||
Aliases: | None | ||
Description: | H3 histone, family 3A [Source:HGNC Symbol;Acc:4764] |
Percent Identity: | 74.6 % |
Parental protein coverage: | 91.91 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | TGGKAPRKQLATKAARKSAPSTGGVKKPHR-YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK |
T.GKA.RKQLA.KAA.KSA...GGVKKPH...RP.TVALREIR.YQKSTE.LI.KLPF..LV..I.QDFK | |
Retrocopy | TCGKAKRKQLAMKAAHKSASFAGGVKKPHH>NRPDTVALREIRCYQKSTEHLIQKLPFRCLV*QISQDFK |
Parental | TDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA |
TDL.FQSAA.GA.QEASEAYLVG.FEDTNL..IH.K.VTIMPKDIQLA..I.G..A | |
Retrocopy | TDLHFQSAATGAFQEASEAYLVGFFEDTNL*HIHVKCVTIMPKDIQLAHCIYGGHA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |