RetrogeneDB ID: | retro_tsyr_1508 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_470076:396..1071(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTSYG00000007340 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 96. % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | SQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFRNMCKLRPLLQ |
SQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFRNMCKLRPLLQ | |
Retrocopy | SQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRFEALQLSFRNMCKLRPLLQ |
Parental | KWVEEADNNENLQEICKAETLVQARKRKRTSIENRVRGNLETLFLQCPKPTLQQISHIAQQLGLEKDVVR |
KWVEEADNNENLQEICKAET.VQARKRKRTS.ENRVRGN.ETLFLQCPKPTL.QISHIAQQLGLEKDVVR | |
Retrocopy | KWVEEADNNENLQEICKAETFVQARKRKRTSTENRVRGNPETLFLQCPKPTL*QISHIAQQLGLEKDVVR |
Parental | VWFCNRRQKGKRSSSDYSQREDYEAAGSPFSGGPVSFPLAPGPHFGTGGYGSPHFTTLYSSVPYPEGEAF |
VWFCNR..KGKRSSSDYSQREDY.AAGSPFSGGPVSFPLAPGPH.GT.GYGSPHFTTLYSSVPYPEGEAF | |
Retrocopy | VWFCNRCHKGKRSSSDYSQREDYKAAGSPFSGGPVSFPLAPGPHCGTAGYGSPHFTTLYSSVPYPEGEAF |
Parental | PSVSVTTLGSPMHSN |
PSVSVTTLGSPMHSN | |
Retrocopy | PSVSVTTLGSPMHSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |