Parental gene: | ENSDNOG00000018648 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3220:187812..193638(+) |
>ENSDNOG00000018648
CTCATCTGTAAATCTCTAAAGAAGAGAATCACCAAACTGATGGCAGGGATTTTGCGCTCCATAGTCCAGAGACCCCCGGA
CAATCTACAGACTTTGACAAAAGGAGTGGAGTCCCTCATTTGTACAGACTGGATTCGTCACAAATTTACCAGGTCAAGAA
TTCCAGATAAGGTATTTCAGATTTCACCTGCAGATCATGAAAAATATGGTGGGGATCCAGAACACCCTCATAAACTGCAT
GTTGTTACCAGAATAAAAGGTGTAAAAGGCCGTCCATATTGGGAAAAAGAGATAATAAAGAAGCTTAAATTAGAAAAG
CTCATCTGTAAATCTCTAAAGAAGAGAATCACCAAACTGATGGCAGGGATTTTGCGCTCCATAGTCCAGAGACCCCCGGA
CAATCTACAGACTTTGACAAAAGGAGTGGAGTCCCTCATTTGTACAGACTGGATTCGTCACAAATTTACCAGGTCAAGAA
TTCCAGATAAGGTATTTCAGATTTCACCTGCAGATCATGAAAAATATGGTGGGGATCCAGAACACCCTCATAAACTGCAT
GTTGTTACCAGAATAAAAGGTGTAAAAGGCCGTCCATATTGGGAAAAAGAGATAATAAAGAAGCTTAAATTAGAAAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 18 .67 RPM |
| SRP012922_cerebellum | 7 .70 RPM |
| SRP012922_heart | 19 .49 RPM |
| SRP012922_kidney | 17 .52 RPM |
| SRP012922_liver | 11 .92 RPM |
| SRP012922_lung | 14 .66 RPM |
| SRP012922_quadricep_muscle | 16 .10 RPM |
| SRP012922_spleen | 21 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013344 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000038949 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000031628 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005804 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007085 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000015993 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005006 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000024233 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000241962 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011677 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011627 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000029851 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011085 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000026087 | ortholog_one2one | 7 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000026974 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004111 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002241 | ortholog_one2many | 11 retrogenes | |
| Ochotona princeps | ENSOPRG00000007331 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012275 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006587 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018511 | ortholog_one2many | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049330 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008183 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005345 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004937 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_571 | 94.34 | 99.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1430 | 94.34 | 99.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1469 | 92.16 | 94.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2019 | 92.16 | 94.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2348 | 84.69 | 90.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000018648 retrocopies