Parental gene: | Mrpl30, ENSMUSG00000026087 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L30 [Source:MGI Symbol;Acc:MGI:1333820] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:37890476..37898535(+) |
>ENSMUSG00000026087
ATGGCTGGGGTTCTGCGCTCCGCGTTCCCGAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGGTGCAGAATCTCTCAT
TGGTACAGAATGGATTCGTCACAAATTTACCAAATCAAGAATTCCAGATAAAGTGTTTCAGCCTAAACCTGAAGATCATG
AAAAGTATGGTGGGGACCCCCAGAACCCTCACAAACTGCACATTGTCACAAGAATAAGAAGTACAAAGAGGCGTCCATAC
TGGGAAAAAGATACCATCAAGATGCTTGGACTACAGAAGGCACACAGCCCTCAAATTCACAAGAACATCCCATCGGTGAA
TGCAAAGCTGAAAGTGGTTAAACACTTGATACGCATCCAGCCTCTGAAGCTGCCACAGGGACTTCCCACAGAAGAGACCA
TGTCCAGCACATGCCTCAAGAGCACTGGGGAGTTGGTCGTGCAGTGGCATCTGAAGCCTGTGGAGCAGGAAGCGAAGTCC
TGA
ATGGCTGGGGTTCTGCGCTCCGCGTTCCCGAGGCCTCCATGCAGACTGCAGACTGTGAAGAAAGGTGCAGAATCTCTCAT
TGGTACAGAATGGATTCGTCACAAATTTACCAAATCAAGAATTCCAGATAAAGTGTTTCAGCCTAAACCTGAAGATCATG
AAAAGTATGGTGGGGACCCCCAGAACCCTCACAAACTGCACATTGTCACAAGAATAAGAAGTACAAAGAGGCGTCCATAC
TGGGAAAAAGATACCATCAAGATGCTTGGACTACAGAAGGCACACAGCCCTCAAATTCACAAGAACATCCCATCGGTGAA
TGCAAAGCTGAAAGTGGTTAAACACTTGATACGCATCCAGCCTCTGAAGCTGCCACAGGGACTTCCCACAGAAGAGACCA
TGTCCAGCACATGCCTCAAGAGCACTGGGGAGTTGGTCGTGCAGTGGCATCTGAAGCCTGTGGAGCAGGAAGCGAAGTCC
TGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 30 .11 RPM |
| SRP007412_cerebellum | 18 .71 RPM |
| SRP007412_heart | 68 .21 RPM |
| SRP007412_kidney | 34 .23 RPM |
| SRP007412_liver | 25 .01 RPM |
| SRP007412_testis | 19 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013344 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000038949 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000031628 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005804 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007085 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000018648 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000015993 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000005006 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000024233 | ortholog_one2one | 4 retrogenes | |
| Homo sapiens | ENSG00000241962 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011677 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011627 | ortholog_one2one | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000029851 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000011085 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026974 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004111 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002241 | ortholog_one2many | 11 retrogenes | |
| Ochotona princeps | ENSOPRG00000007331 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000012275 | ortholog_one2one | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000006587 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018511 | ortholog_one2many | 6 retrogenes | |
| Rattus norvegicus | ENSRNOG00000049330 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000008183 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005345 | ortholog_one2one | 4 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004937 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_331 | 53.16 | 95.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_755 | 90.32 | 96.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1171 | 70.50 | 86.25 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1367 | 82.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1758 | 55.56 | 55.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_3680 | 89.66 | 72.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_3724 | 85.28 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026087 retrocopies