Parental gene:

MDH1, ENSG00000014641

Aliases:MDH1, HEL-S-32, MDH-s, MDHA, MGC:1375, MOR2
Description:malate dehydrogenase 1, NAD (soluble) [Source:HGNC Symbol;Acc:6970]
Organism:Human (Homo sapiens)
Coordinates:2:63815742..63834331(+)


>ENSG00000014641
ATGCGACGCTGCAGCTATTTTCCAAAGGACGTTACGGTGTTTGATAAGGACGATAAGTCTGAACCAATCAGAGTCCTTGT
GACTGGAGCAGCTGGTCAAATTGCATATTCACTGCTGTACAGTATTGGAAATGGATCTGTCTTTGGTAAAGATCAGCCTA
TAATTCTTGTGCTGTTGGATATCACCCCCATGATGGGTGTCCTGGACGGTGTCCTAATGGAACTGCAAGACTGTGCCCTT
CCCCTCCTGAAAGATGTCATCGCAACAGATAAAGAAGACGTTGCCTTCAAAGACCTGGATGTGGCCATTCTTGTGGGCTC
CATGCCAAGAAGGGAAGGCATGGAGAGAAAAGATTTACTGAAAGCAAATGTGAAAATCTTCAAATCCCAGGGTGCAGCCT
TAGATAAATACGCCAAGAAGTCAGTTAAGGTTATTGTTGTGGGTAATCCAGCCAATACCAACTGCCTGACTGCTTCCAAG
TCAGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACTCGTTTGGATCACAACCGAGCTAAAGCTCAAATTGCTCT
TAAACTTGGTGTGACTGCTAATGATGTAAAGAATGTCATTATCTGGGGAAACCATTCCTCGACTCAGTATCCAGATGTCA
ACCATGCCAAGGTGAAATTGCAAGGAAAGGAAGTTGGTGTTTATGAAGCTCTGAAAGATGACAGCTGGCTCAAGGGAGAA
TTTGTCACGACTGTGCAGCAGCGTGGCGCTGCTGTCATCAAGGCTCGAAAACTATCCAGTGCCATGTCTGCTGCAAAAGC
CATCTGTGACCACGTCAGGGACATCTGGTTTGGAACCCCAGAGGGAGAGTTTGTGTCCATGGGTGTTATCTCTGATGGCA
ACTCCTATGGTGTTCCTGATGATCTGCTCTACTCATTCCCTGTTGTAATCAAGAATAAGACCTGGAAGTTTGTTGAAGGT
CTCCCTATTAATGATTTCTCACGTGAGAAGATGGATCTTACTGCAAAGGAACTGACAGAAGAAAAAGAAAGTGCTTTTGA
ATTTCTTTCCTCTGCCTGA

Library Parental gene expression (RPM)
bodymap2_liver 98 .71 RPM
bodymap2_lung 56 .58 RPM
bodymap2_breast 192 .16 RPM
bodymap2_adipose 44 .39 RPM
bodymap2_adrenal 78 .93 RPM
bodymap2_skeletal_muscle 57 .95 RPM
bodymap2_thyroid 105 .53 RPM
bodymap2_prostate 126 .97 RPM
bodymap2_colon 88 .67 RPM
bodymap2_testis 72 .89 RPM
bodymap2_brain 371 .15 RPM
bodymap2_heart 768 .48 RPM
bodymap2_white_blood_cells 72 .47 RPM
bodymap2_lymph_node 70 .72 RPM
bodymap2_ovary 57 .81 RPM
bodymap2_kidney 211 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019295 ortholog_one2one 1 retrogene
retro_btau_466,
Choloepus hoffmanni ENSCHOG00000007281 ortholog_one2one 5 retrogenes
retro_chof_1260, retro_chof_1513, retro_chof_1892, retro_chof_2001, retro_chof_90,
Callithrix jacchus ENSCJAG00000007018 ortholog_one2many 4 retrogenes
retro_cjac_1848, retro_cjac_2407, retro_cjac_2418, retro_cjac_282,
Dasypus novemcinctus ENSDNOG00000013329 ortholog_one2one 2 retrogenes
retro_dnov_109, retro_dnov_2562,
Gorilla gorilla ENSGGOG00000007085 ortholog_one2one 1 retrogene
retro_ggor_2316,
Loxodonta africana ENSLAFG00000016504 ortholog_one2one 2 retrogenes
retro_lafr_1134, retro_lafr_972,
Macaca mulatta ENSMMUG00000006163 ortholog_one2one 2 retrogenes
retro_mmul_1750, retro_mmul_2496,
Nomascus leucogenys ENSNLEG00000009823 ortholog_one2one 1 retrogene
retro_nleu_1363,
Otolemur garnettii ENSOGAG00000014487 ortholog_one2many 1 retrogene
retro_ogar_741,
Pongo abelii ENSPPYG00000012373 ortholog_one2one 1 retrogene
retro_pabe_2839,
Pan troglodytes ENSPTRG00000011974 ortholog_one2one 1 retrogene
retro_ptro_2326,
Sorex araneus ENSSARG00000007690 ortholog_one2one 1 retrogene
retro_sara_361,
Sus scrofa ENSSSCG00000025751 ortholog_one2many 1 retrogene
retro_sscr_779,
Tarsius syrichta ENSTSYG00000001215 ortholog_one2one 2 retrogenes
retro_tsyr_1790, retro_tsyr_190,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3426 67.39 68.26
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Download FASTA sequences of all ENSG00000014641 retrocopies