Parental gene: | MDH1, ENSLAFG00000016504 |
| Aliases: | None |
| Description: | Malate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:G3TH55] |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_27:14584952..14612502(+) |
>ENSLAFG00000016504
CAGTCTGAACCAATCAGAGTCCTTGTGACTGGAGCAGCTGGTCAAATTGCATATTCACTGCTGTACAGTATTGGAAATGG
CTCTATCTTTGGTAAAGACCAGCCCCTGATTCTCCTGCTGTTGGATATCACTCCCATGATGGGTGTCCTGGAAGGTGTCT
TAATGGAACTGCAGGACTGTGCACTTCCCCTCCTGACAGATATCATTGCAACAGATAAGGAAGAGGTTGCCTTCAAAGAC
CTGGATGTGGCCGTTCTCGTGGGTTCCATGCCAAGAAGGGAGGGCATGGAGAGGAAGGACTTACTGAAAGCCAATGTGAA
AATCTTCAAATCCCAAGGGGCAGCCTTGGATAAATATGCCAAGAAGTCAGTTAAGGTCATCGTCGTGGGGAACCCAGCCA
ATACTAACTGCCTGACTGCCATAAAGTCAGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACTCGTTTGGATCAT
AACCGAGCTATAGGCCAAATTGTGCTTAAACTTGGTGTGACTGCTAAAGACGTAAAGAATGTCATCATCTGGGGAAACCA
TTCCTCTACTCAGTATCCAGATGTCAGCCATGCCAAGGTGAAATTTCAAGGAAAGGAAGTTGGTGTGTACGAAGCTCTGA
AAGATGACAGCTGGCTCAAGGGAGAATTCATCACAACCGTGCAGCAGCGTGGCGCTGCTGTCATCAAGGCACGAAAACTG
TCCAGCGCAATGTCTGCTGCGAAAGCCATTGGCGACCACATCAGAGACATCTGGTTTGGCACCCCAGAGGGAGAGTTTGT
GTCCATGGGTGTAATCTCCGATGGCAACCCCTATGGTGTTCCCGATGATCTGCTCTACTCGTTCCCGGTTGTCATCGAGA
ATAAGACCTGGAAGATTGTTGAGGGTCTCACTATTAATGATTTCTCACGTGAGAAGATGGATCTTACTGCAAAGGAACTA
ACAGAAGAAAAAGAAAATGCTTTTGAATATCTTTCCTCTGCCTGA
CAGTCTGAACCAATCAGAGTCCTTGTGACTGGAGCAGCTGGTCAAATTGCATATTCACTGCTGTACAGTATTGGAAATGG
CTCTATCTTTGGTAAAGACCAGCCCCTGATTCTCCTGCTGTTGGATATCACTCCCATGATGGGTGTCCTGGAAGGTGTCT
TAATGGAACTGCAGGACTGTGCACTTCCCCTCCTGACAGATATCATTGCAACAGATAAGGAAGAGGTTGCCTTCAAAGAC
CTGGATGTGGCCGTTCTCGTGGGTTCCATGCCAAGAAGGGAGGGCATGGAGAGGAAGGACTTACTGAAAGCCAATGTGAA
AATCTTCAAATCCCAAGGGGCAGCCTTGGATAAATATGCCAAGAAGTCAGTTAAGGTCATCGTCGTGGGGAACCCAGCCA
ATACTAACTGCCTGACTGCCATAAAGTCAGCTCCATCCATCCCCAAGGAGAACTTCAGTTGCTTGACTCGTTTGGATCAT
AACCGAGCTATAGGCCAAATTGTGCTTAAACTTGGTGTGACTGCTAAAGACGTAAAGAATGTCATCATCTGGGGAAACCA
TTCCTCTACTCAGTATCCAGATGTCAGCCATGCCAAGGTGAAATTTCAAGGAAAGGAAGTTGGTGTGTACGAAGCTCTGA
AAGATGACAGCTGGCTCAAGGGAGAATTCATCACAACCGTGCAGCAGCGTGGCGCTGCTGTCATCAAGGCACGAAAACTG
TCCAGCGCAATGTCTGCTGCGAAAGCCATTGGCGACCACATCAGAGACATCTGGTTTGGCACCCCAGAGGGAGAGTTTGT
GTCCATGGGTGTAATCTCCGATGGCAACCCCTATGGTGTTCCCGATGATCTGCTCTACTCGTTCCCGGTTGTCATCGAGA
ATAAGACCTGGAAGATTGTTGAGGGTCTCACTATTAATGATTTCTCACGTGAGAAGATGGATCTTACTGCAAAGGAACTA
ACAGAAGAAAAAGAAAATGCTTTTGAATATCTTTCCTCTGCCTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019295 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007281 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007018 | ortholog_one2many | 4 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013329 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000014641 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007085 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006163 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000009823 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014487 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012373 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011974 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000007690 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000025751 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001215 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_972 | 82.94 | 62.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_lafr_1134 | 97.24 | 64.97 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000016504 retrocopies