Parental gene:

RPL5, ENSGGOG00000002699

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:95304945..95314826(+)


>ENSGGOG00000002699
CGCCGGTCTCTGTTCCGCAGGATGGGGTTTGTTAAAGTTGTTAAGAATAAGGCCTACTTTAAGAGATACCAAGTGAAATT
TAGAAGACGACGAGAGGGTAAAACTGATTATTATGCTCGGAAACGCTTGGTGATACAAGATAAAAATAAATACAACACAC
CCAAATACAGGATGATAGTTCGTGTAACAAACAGAGATATCATTTGTCAGATTGCTTATGCCCGTATAGAGGGGGATATG
ATAGTCTGCGCAGCGTATGCACACGAACTGCCAAAATATGGTGTGAAGGTTGGCCTGACAAATTATGCTGCAGCATATTG
TACTGGCCTGCTGCTGGCCCGCAGGCTTCTCAATAGGTTTGGCATGGACAAGATCTATGAAGGCCAAGTGGAGGTGACTG
GTGATGAATACAATGTGGAAAGCATTGATGGTCAGCCAGGTGCCTTCACCTGCTATTTGGATGCAGGCCTTGCCAGAACT
ACCACTGGCAATAAAGTTTTTGGTGCCCTGAAGGGAGCTGTGGATGGAGGCTTGTCTATCCCTCACAGTACCAAACGATT
CCCTGGTTATGATTCTGAAAGCAAGGAATTTAATGCAGAAGTACATCGGAAGCACATCATGGGCCAGAATGTTGCAGATT
ACATGCGCTACTTAATGGAAGAAGATGAAGATGCTTACAAGAAACAGTTCTCTCAATACATAAAGAACAGCGTAACTCCA
GACATGATGGAGGAGATGTATAAGAAAGCTCATGCTGCTATACGAGAGAATCCAGTCTATGAAAAGAAGCCCAAGAAAGA
AGTTAAAAAGAAGAGGTGGAACCGTCCCAAAATGTCCCTTGCTCAGAAGAAGGATCGGGTAGCTCAAAAGAAGGCAAGCT
TCCTCAGAGCTCAGGAGCGGGCTGCTGAGAGCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 103 .48 RPM
SRP007412_cerebellum 127 .93 RPM
SRP007412_heart 69 .95 RPM
SRP007412_kidney 355 .82 RPM
SRP007412_liver 276 .52 RPM
SRP007412_testis 255 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000002852 ortholog_one2one 1 retrogene
retro_eeur_620,
Echinops telfairi ENSETEG00000009889 ortholog_one2one 8 retrogenes
retro_etel_1044, retro_etel_1089, retro_etel_1103, retro_etel_1264, retro_etel_2028, retro_etel_64, retro_etel_785, retro_etel_814,
Homo sapiens ENSG00000122406 ortholog_one2one 30 retrogenes
retro_hsap_1266, retro_hsap_138, retro_hsap_1469, retro_hsap_1539, retro_hsap_1588, retro_hsap_1767, retro_hsap_183, retro_hsap_1989, retro_hsap_2143, retro_hsap_2385, retro_hsap_2594, retro_hsap_2600, retro_hsap_2777, retro_hsap_2962, retro_hsap_3105, retro_hsap_3178, retro_hsap_3181, retro_hsap_3209, retro_hsap_3430, retro_hsap_3520, retro_hsap_3941, retro_hsap_4048, retro_hsap_4104, retro_hsap_486, retro_hsap_590, retro_hsap_632, retro_hsap_646, retro_hsap_742, retro_hsap_780, retro_hsap_827,
Macropus eugenii ENSMEUG00000006361 ortholog_one2many 3 retrogenes
retro_meug_1168, retro_meug_1537, retro_meug_2146,
Myotis lucifugus ENSMLUG00000008956 possible_ortholog 1 retrogene
retro_mluc_925,
Monodelphis domestica ENSMODG00000011635 ortholog_one2many 1 retrogene
retro_mdom_748,
Nomascus leucogenys ENSNLEG00000010500 ortholog_one2many 2 retrogenes
retro_nleu_2102, retro_nleu_39,
Ornithorhynchus anatinus ENSOANG00000004669 ortholog_many2many 1 retrogene
retro_oana_97,
Otolemur garnettii ENSOGAG00000013246 ortholog_one2one 6 retrogenes
retro_ogar_1164, retro_ogar_134, retro_ogar_1627, retro_ogar_2374, retro_ogar_2633, retro_ogar_707,
Petromyzon marinus ENSPMAG00000002040 ortholog_one2many 1 retrogene
retro_pmar_23,
Pongo abelii ENSPPYG00000001152 ortholog_one2many 32 retrogenes
retro_pabe_1053, retro_pabe_1219, retro_pabe_1274, retro_pabe_1307, retro_pabe_1331, retro_pabe_1501, retro_pabe_1918, retro_pabe_1931, retro_pabe_2019, retro_pabe_2123, retro_pabe_2238, retro_pabe_2457, retro_pabe_246, retro_pabe_247, retro_pabe_2640, retro_pabe_2641, retro_pabe_2658, retro_pabe_2813, retro_pabe_2841, retro_pabe_2909, retro_pabe_3247, retro_pabe_3320, retro_pabe_3360, retro_pabe_3534, retro_pabe_446, retro_pabe_447, retro_pabe_480, retro_pabe_51, retro_pabe_562, retro_pabe_572, retro_pabe_637, retro_pabe_740,
Pan troglodytes ENSPTRG00000000963 ortholog_one2one 30 retrogenes
retro_ptro_1038, retro_ptro_1068, retro_ptro_1184, retro_ptro_1326, retro_ptro_139, retro_ptro_1519, retro_ptro_1524, retro_ptro_1568, retro_ptro_169, retro_ptro_1744, retro_ptro_1878, retro_ptro_2005, retro_ptro_2241, retro_ptro_2262, retro_ptro_2264, retro_ptro_2329, retro_ptro_2391, retro_ptro_2674, retro_ptro_2742, retro_ptro_2785, retro_ptro_2941, retro_ptro_3027, retro_ptro_366, retro_ptro_433, retro_ptro_460, retro_ptro_470, retro_ptro_528, retro_ptro_577, retro_ptro_866, retro_ptro_997,
Sarcophilus harrisii ENSSHAG00000006417 ortholog_one2many 1 retrogene
retro_shar_202,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_233 85.90 100.00
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2. retro_ggor_264 85.80 57.89
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3. retro_ggor_457 86.89 100.00
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4. retro_ggor_521 78.69 99.01
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5. retro_ggor_553 73.51 87.83
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6. retro_ggor_622 86.99 79.93
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7. retro_ggor_647 86.17 92.76
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8. retro_ggor_996 78.67 69.08
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9. retro_ggor_1129 86.01 79.28
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10. retro_ggor_1172 91.73 83.22
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11. retro_ggor_1206 88.40 81.91
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12. retro_ggor_1342 80.59 77.96
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13. retro_ggor_1343 79.27 53.95
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14. retro_ggor_1656 87.66 77.30
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15. retro_ggor_1934 77.92 99.34
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16. retro_ggor_2052 86.53 97.04
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17. retro_ggor_2130 59.62 50.33
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18. retro_ggor_2178 81.71 79.28
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19. retro_ggor_2243 76.06 83.88
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20. retro_ggor_2318 76.82 99.01
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21. retro_ggor_2380 84.44 99.34
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22. retro_ggor_2649 84.82 99.34
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23. retro_ggor_2715 88.33 78.95
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24. retro_ggor_2755 82.09 65.79
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Download FASTA sequences of all ENSGGOG00000002699 retrocopies