RetrogeneDB - Parental gene ENSPPYG00000013588 details

							
>ENSPPYG00000013588
TTCTCTCTTTCTTTTCGCCATCTTTTCTCCTTTCGTGGAGCTGTCGCCATGAAGGTCGAGCTGTGCAGTTTTAGCGGGTA

CAAGATCTACCCTGGACACGGGAGGCGCTACGCCAGGACCGACGGGAAGGTTTTCCAGTTTCTTAATGCGAAATGCGAGT

CGGCGTTCCTTTCCAAGAGGAATCCTCGGCAGATAAACTGGACTGTCCTCTACAGAAGGAAGCACAAAAAGGGACAGTCG

GAAGAAATTCAAAAGAAAAGAACCCGCCGAGCAGTCAAATTCCAGAGGGCCATTACTGGTGCATCTCTTGCTGATATAAT

GGCCAAGAGGAATCAGAAACCTGAAGTTAGAAAGGCTCAACGAGAACAAGCTATCAGGGCTGCTAAGGAAGCAAAAAAGG

CCAAGCAAGCATCTAAAAAGACTGCAATGGCTGCTGCTAAGGCACCTACAAAGGCAGCACCTAAGCAAAAGATTGTGAAG

CCTGTGAAAGTCTCAGCTCCTCGAGTTGGTGGAAAACGCTAA

Library	Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex	103 .56 RPM
SRP007412_cerebellum	163 .31 RPM
SRP007412_heart	131 .37 RPM
SRP007412_kidney	239 .58 RPM
SRP007412_liver	270 .98 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Bos taurus	ENSBTAG00000013461	ortholog_one2one	1 retrogene	retro_btau_1143,
Callithrix jacchus	ENSCJAG00000000496	possible_ortholog	3 retrogenes	retro_cjac_2544, retro_cjac_2941, retro_cjac_327,
Cavia porcellus	ENSCPOG00000019941	possible_ortholog	5 retrogenes	retro_cpor_1020, retro_cpor_461, retro_cpor_474, retro_cpor_904, retro_cpor_947,
Dasypus novemcinctus	ENSDNOG00000003194	ortholog_one2one	9 retrogenes	retro_dnov_1209, retro_dnov_1259, retro_dnov_1449, retro_dnov_1643, retro_dnov_2191, retro_dnov_2407, retro_dnov_2537, retro_dnov_523, retro_dnov_657,
Erinaceus europaeus	ENSEEUG00000009320	ortholog_one2one	3 retrogenes	retro_eeur_505, retro_eeur_534, retro_eeur_621,
Felis catus	ENSFCAG00000003327	possible_ortholog	1 retrogene	retro_fcat_31,
Homo sapiens	ENSG00000114391	ortholog_one2one	8 retrogenes	retro_hsap_1437, retro_hsap_1752, retro_hsap_2418, retro_hsap_2614, retro_hsap_2743, retro_hsap_281, retro_hsap_3583, retro_hsap_4179,
Gorilla gorilla	ENSGGOG00000011609	ortholog_one2one	8 retrogenes	retro_ggor_1106, retro_ggor_1504, retro_ggor_1831, retro_ggor_1909, retro_ggor_2252, retro_ggor_2417, retro_ggor_2803, retro_ggor_324,
Macropus eugenii	ENSMEUG00000009177	ortholog_one2one	7 retrogenes	retro_meug_1769, retro_meug_371, retro_meug_385, retro_meug_449, retro_meug_730, retro_meug_759, retro_meug_963,
Myotis lucifugus	ENSMLUG00000017005	possible_ortholog	4 retrogenes	retro_mluc_1990, retro_mluc_2185, retro_mluc_35, retro_mluc_393,
Macaca mulatta	ENSMMUG00000015059	possible_ortholog	9 retrogenes	retro_mmul_1234, retro_mmul_1711, retro_mmul_1803, retro_mmul_2263, retro_mmul_2521, retro_mmul_37, retro_mmul_560, retro_mmul_609, retro_mmul_823,
Monodelphis domestica	ENSMODG00000001916	ortholog_one2one	3 retrogenes	retro_mdom_675, retro_mdom_854, retro_mdom_974,
Nomascus leucogenys	ENSNLEG00000003276	ortholog_one2one	6 retrogenes	retro_nleu_1413, retro_nleu_1790, retro_nleu_1894, retro_nleu_2031, retro_nleu_2815, retro_nleu_2937,
Oryctolagus cuniculus	ENSOCUG00000000791	ortholog_one2one	8 retrogenes	retro_ocun_1401, retro_ocun_190, retro_ocun_303, retro_ocun_323, retro_ocun_420, retro_ocun_480, retro_ocun_526, retro_ocun_531,
Ochotona princeps	ENSOPRG00000004255	ortholog_one2one	6 retrogenes	retro_opri_1100, retro_opri_1109, retro_opri_1131, retro_opri_900, retro_opri_918, retro_opri_95,
Procavia capensis	ENSPCAG00000005918	ortholog_one2one	1 retrogene	retro_pcap_192,
Pan troglodytes	ENSPTRG00000015176	ortholog_one2one	2 retrogenes	retro_ptro_1214, retro_ptro_85,
Pteropus vampyrus	ENSPVAG00000009889	ortholog_one2one	3 retrogenes	retro_pvam_1317, retro_pvam_743, retro_pvam_831,
Rattus norvegicus	ENSRNOG00000001611	possible_ortholog	25 retrogenes	retro_rnor_1244, retro_rnor_1245, retro_rnor_1247, retro_rnor_1248, retro_rnor_1250, retro_rnor_1251, retro_rnor_1252, retro_rnor_1253, retro_rnor_1452, retro_rnor_1643, retro_rnor_1699, retro_rnor_1850, retro_rnor_1851, retro_rnor_1985, retro_rnor_2026, retro_rnor_2134, retro_rnor_2148, retro_rnor_2205, retro_rnor_2214, retro_rnor_2294, retro_rnor_2709, retro_rnor_435, retro_rnor_751, retro_rnor_964, retro_rnor_993,
Sorex araneus	ENSSARG00000007615	ortholog_one2one	6 retrogenes	retro_sara_198, retro_sara_204, retro_sara_330, retro_sara_535, retro_sara_574, retro_sara_711,
Sarcophilus harrisii	ENSSHAG00000008226	ortholog_one2one	2 retrogenes	retro_shar_171, retro_shar_264,
Ictidomys tridecemlineatus	ENSSTOG00000014654	possible_ortholog	2 retrogenes	retro_itri_442, retro_itri_69,
Tupaia belangeri	ENSTBEG00000012044	ortholog_one2one	30 retrogenes	retro_tbel_1349, retro_tbel_1429, retro_tbel_1676, retro_tbel_2076, retro_tbel_2248, retro_tbel_2553, retro_tbel_2836, retro_tbel_2853, retro_tbel_2931, retro_tbel_3363, retro_tbel_3507, retro_tbel_3544, retro_tbel_3552, retro_tbel_3557, retro_tbel_3634, retro_tbel_3636, retro_tbel_3664, retro_tbel_4105, retro_tbel_4114, retro_tbel_4139, retro_tbel_4236, retro_tbel_4237, retro_tbel_431, retro_tbel_4677, retro_tbel_569, retro_tbel_607, retro_tbel_678, retro_tbel_700, retro_tbel_73, retro_tbel_779,
Tarsius syrichta	ENSTSYG00000002314	ortholog_one2one	4 retrogenes	retro_tsyr_266, retro_tsyr_285, retro_tsyr_401, retro_tsyr_460,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_pabe_1191	71.22	80.35	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_pabe_1450	68.60	68.21	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_pabe_1782	85.38	98.27	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_pabe_2277	87.21	98.27	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_pabe_2343	81.67	68.79	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_pabe_3419	90.06	98.84	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSPPYG00000013588 retrocopies

Parental gene:	RPL24, ENSPPYG00000013588
Aliases:	None
Description:	ribosomal protein L24 [Source:HGNC Symbol;Acc:10325]
Organism:	*Orangutan (Pongo abelii)*
Coordinates:	3:31463407..31468922(+)

Parental gene:

RPL24, ENSPPYG00000013588