RetrogeneDB ID: | retro_meug_1769 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold57910:11747..12134(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL24 | ||
Ensembl ID: | ENSMEUG00000009177 | ||
Aliases: | None | ||
Description: | ribosomal protein L24 [Source:HGNC Symbol;Acc:10325] |
Percent Identity: | 72.09 % |
Parental protein coverage: | 99.23 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKKGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQK |
VFQ.L.AK.ESAFLSKR.P..INWTVLYRRKHK..QSEEIQKKRT....KF.RA.TGASLADIMAKRN.K | |
Retrocopy | VFQCLKAKYESAFLSKRKPLAINWTVLYRRKHK*RQSEEIQKKRTCWDGKFHRAFTGASLADIMAKRNHK |
Parental | PEVRKAQREQAIRAAKEAKKAKQATKKTAASAAKAPTKAAPKQKIVKPVKVSAPRVGGK |
P.V.KAQREQAIR............KKTAASAAKAPTKAAPK.KIV...K.S.P.VGGK | |
Retrocopy | PKVQKAQREQAIRTXXXXXXXXXXXKKTAASAAKAPTKAAPKRKIVRSMKISMP*VGGK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |