RetrogeneDB ID: | retro_tbel_779 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3:149019..149409(+) | ||
Located in intron of: | ENSTBEG00000007206 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL24 | ||
Ensembl ID: | ENSTBEG00000012044 | ||
Aliases: | None | ||
Description: | ribosomal protein L24 [Source:HGNC Symbol;Acc:10325] |
Percent Identity: | 70.45 % |
Parental protein coverage: | 80. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQIN-TVLY-RKHKKGQSEEIQKK |
.KV.LC.FSG.KIYPGH.RRYA.TD.KVFQFLNAKC.SA.L.KRNP.QIN.TVLY.RKH.KGQSEEIQKK | |
Retrocopy | IKV*LCCFSGNKIYPGHRRRYAGTDRKVFQFLNAKCKSAVLPKRNPEQINWTVLYRRKHRKGQSEEIQKK |
Parental | RPRR-AVKFQRAITGASL-ADIMAKRNQKPEVRKAQREQAIRAAKEAKK----AKQASKKTA |
R..R.AV..QRAITGASL..DIMAKRNQKPEVRKA............KK.....KQA.KKTA | |
Retrocopy | RTHR>AVRVQRAITGASL<SDIMAKRNQKPEVRKALVITSYQGCQGSKKG*LITKQAFKKTA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |