RetrogeneDB ID: | retro_chof_1674 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_355441:1..337(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FUNDC2 | ||
Ensembl ID: | ENSCHOG00000004306 | ||
Aliases: | None | ||
Description: | FUN14 domain containing 2 [Source:HGNC Symbol;Acc:24925] |
Percent Identity: | 94.83 % |
Parental protein coverage: | 78.47 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | NFEGNFDSLDLAELAKKQPWWRKLFGQESGPSAEKYSVATQLLIGGVTGWCTGFIFQKVGKLAATAVGGG |
NFEGNFDSLDLAELAKKQPWWRKLFGQESGPSAEKYSVATQLLIGGVTGWCTGFIFQKVGKLAATAVGGG | |
Retrocopy | NFEGNFDSLDLAELAKKQPWWRKLFGQESGPSAEKYSVATQLLIGGVTGWCTGFIFQKVGKLAATAVGGG |
Parental | FFLLQLANHTGYIKVDWQRVEK-DMK-KAKEQLKIHK-SNQIPTEV |
FFLLQLANHTGYIKVDWQRVEK.DM..KAKEQLKI...SNQIPTEV | |
Retrocopy | FFLLQLANHTGYIKVDWQRVEK<DMR<KAKEQLKIRR<SNQIPTEV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |