RetrogeneDB ID: | retro_etel_1230 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_232098:747..1123(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 90. % |
Parental protein coverage: | 94.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MGKFMKPG-KVVLVLAGRYSGRKAVIVKNIDDGTSDRP-YSHALVAGIDRYPRKVTAAMGKKKIAKRSKI |
MGKFMKPG.KVVLVLAGR.SGRKAVIVK.IDDGTS.RP.YSHALVA.ID..P.KVTAAMG.KKIAKRSK. | |
Retrocopy | MGKFMKPG<KVVLVLAGR*SGRKAVIVKSIDDGTSERP<YSHALVAAID--PCKVTAAMGEKKIAKRSKS |
Parental | KSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNK |
KSFVKVYNYNHLMPTRYSVDIPLDKT.VNKDVFRDPALKRKAR.EAKVKFEERYKTGKNK | |
Retrocopy | KSFVKVYNYNHLMPTRYSVDIPLDKTMVNKDVFRDPALKRKARQEAKVKFEERYKTGKNK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |