RetrogeneDB ID: | retro_etel_278 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4621:551241..551646(-) | ||
Located in intron of: | ENSETEG00000013917 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 82.01 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRP-YSHALVAGIDRYPRKVTAAMGKKKIAKRS-KI |
MGK...PGKVVL.LAG.Y.G.KAVI.KNI..GTSDRP.YSHALVAGID.YP.KVTAAMGKKK.AKRS.KI | |
Retrocopy | MGKSRRPGKVVLALAGLYLGCKAVIMKNIGIGTSDRP<YSHALVAGIDFYPCKVTAAMGKKKVAKRS<KI |
Parental | KSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARR-EAKVKFEERYKTGKNKWFFQKLRF |
KSFVKVYNYNHLMPTRYS.DI..DKT..NKDVFRDPALK.KA.R.EAKVKF.ERYK.GKNKWFFQKLRF | |
Retrocopy | KSFVKVYNYNHLMPTRYSRDIHWDKTIINKDVFRDPALKHKAHR<EAKVKFGERYKAGKNKWFFQKLRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |