RetrogeneDB ID: | retro_etel_415 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_6899:147673..147971(-) | ||
Located in intron of: | ENSETEG00000009013 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 82.69 % |
Parental protein coverage: | 75. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MGKFMKPGKVVLVLAGRYS-GRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAK-RSKI |
M.KFMKPGKVVLVL.GRYS.GRKAVI.KN.DDGTSDRPYSHAL.AGIDR..RKVTAA..KKKIAK.RSKI | |
Retrocopy | MCKFMKPGKVVLVLVGRYS<GRKAVILKNMDDGTSDRPYSHALAAGIDRDSRKVTAATDKKKIAK<RSKI |
Parental | KSFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFR |
.SFVKV..YNHL.P.RYSVDIPLDKT.VNKDV.R | |
Retrocopy | RSFVKV--YNHLVPMRYSVDIPLDKTIVNKDVLR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |