RetrogeneDB ID: | retro_etel_177 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_3043:266798..267205(+) | ||
Located in intron of: | ENSETEG00000018235 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 86.13 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MGKFMKPGKVVLVLA-GRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIK |
MGKFM.PGKVVLVL..GRYSG..A..VKN.DDGTSD.PYSH.LVAG.D.YPRKVTAAMGKKKIAKRSKIK | |
Retrocopy | MGKFMRPGKVVLVLV<GRYSGCRAITVKNTDDGTSDCPYSHTLVAGSDCYPRKVTAAMGKKKIAKRSKIK |
Parental | SFVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
SFVK.YNYNHLMPTRYS.DIPLDKT.VNKDVFRDP.LKRKA.REAKVKFEER.KTGKNKWFFQK.RF | |
Retrocopy | SFVKAYNYNHLMPTRYSIDIPLDKTIVNKDVFRDPVLKRKALREAKVKFEERNKTGKNKWFFQKRRF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |