RetrogeneDB ID: | retro_etel_751 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_158570:4963..5372(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 88.32 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKS |
MGKFMKPGKVVLVLAGRYS..KAVIVKN..DGTSDRPYS.A.VAGIDRYP.KVTAAMGKKKIAKRSKIKS | |
Retrocopy | MGKFMKPGKVVLVLAGRYSRCKAVIVKNMNDGTSDRPYSQAPVAGIDRYPCKVTAAMGKKKIAKRSKIKS |
Parental | FVKVYNYNHLMPTRYSVDIPLDKTVVNKD-VFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
FVKVYNYNHLMPTRYSVD.PLDKT.VNK..VFRD.AL.RKA..EAKVKFEERYKTGKNKWFFQKL.F | |
Retrocopy | FVKVYNYNHLMPTRYSVDSPLDKTIVNKE>VFRDAALQRKAHLEAKVKFEERYKTGKNKWFFQKL*F |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |