Parental gene:

ENSFCAG00000013142

Aliases:None
Description:None
Organism:Cat (Felis catus)
Coordinates:E1:43438391..43441103(+)


>ENSFCAG00000013142
TCCCCTGCAGAGATGGGCAAATTCATGAAACCCGGGAAGGTGGTGCTGGTCCTGGCCGGACGCTACTCCGGACGCAAGGC
GGTCATCGTGAAGAACATCGATGATGGCACCTCAGACCGTCCCTACAGCCACGCTCTGGTGGCTGGAATTGACCGCTATC
CCCGCAAAGTGACAGCTGCCATGGGCAAGAAGAAAATCGCCAAGAGGTCAAAGATCAAGTCTTTTGTGAAAGTTTATAAC
TACAATCACCTCATGCCCACAAGGTACTCTGTGGATATCCCCTTGGACAAAACTGTTGTCAACAAGGATGTCTTCAGAGA
CCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCAAGTTCGAGGAGAGGTACAAGACCGGCAAGAACAAATGGT
TCTTCCAGAAGCTGCGGTTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 52 .22 RPM
SRP017611_kidney 228 .38 RPM
SRP017611_liver 104 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000200 ortholog_many2many 3 retrogenes
Bos taurus ENSBTAG00000017441 ortholog_many2many 6 retrogenes
Canis familiaris ENSCAFG00000014630 ortholog_many2many 6 retrogenes
Callithrix jacchus ENSCJAG00000013067 possible_ortholog 9 retrogenes
Cavia porcellus ENSCPOG00000027359 possible_ortholog 3 retrogenes
Dipodomys ordii ENSDORG00000010907 possible_ortholog 6 retrogenes
Equus caballus ENSECAG00000007500 ortholog_one2many 1 retrogene
Echinops telfairi ENSETEG00000002811 possible_ortholog 23 retrogenes
Homo sapiens ENSG00000131469 possible_ortholog 6 retrogenes
Gorilla gorilla ENSGGOG00000026039 possible_ortholog 6 retrogenes
Loxodonta africana ENSLAFG00000014220 possible_ortholog 3 retrogenes
Microcebus murinus ENSMICG00000014214 possible_ortholog 5 retrogenes
Myotis lucifugus ENSMLUG00000004119 possible_ortholog 1 retrogene
Macaca mulatta ENSMMUG00000008090 possible_ortholog 7 retrogenes
Monodelphis domestica ENSMODG00000015128 ortholog_one2many 1 retrogene
Mustela putorius furo ENSMPUG00000009913 ortholog_one2many 11 retrogenes
Mus musculus ENSMUSG00000063316 possible_ortholog 2 retrogenes
Nomascus leucogenys ENSNLEG00000011901 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000003872 possible_ortholog 1 retrogene
Otolemur garnettii ENSOGAG00000003940 possible_ortholog 14 retrogenes
Procavia capensis ENSPCAG00000013249 possible_ortholog 4 retrogenes
Pan troglodytes ENSPTRG00000009232 possible_ortholog 6 retrogenes
Pteropus vampyrus ENSPVAG00000008817 possible_ortholog 4 retrogenes
Rattus norvegicus ENSRNOG00000020674 possible_ortholog 8 retrogenes
Sorex araneus ENSSARG00000011131 ortholog_one2many 10 retrogenes
Sarcophilus harrisii ENSSHAG00000012042 ortholog_many2many 4 retrogenes
Sus scrofa ENSSSCG00000025507 ortholog_one2many 5 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000020555 possible_ortholog 5 retrogenes
Tarsius syrichta ENSTSYG00000003167 possible_ortholog 12 retrogenes
Tursiops truncatus ENSTTRG00000011739 ortholog_one2many 2 retrogenes
Vicugna pacos ENSVPAG00000002574 ortholog_one2many 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_78 76.19 90.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_fcat_228 71.03 73.57
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_fcat_698 91.84 70.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_fcat_1026 67.68 68.57
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_fcat_1184 80.29 97.86
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_fcat_1824 71.88 68.57
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSFCAG00000013142 retrocopies