RetrogeneDB ID: | retro_etel_971 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_193374:939..1345(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL27 | ||
Ensembl ID: | ENSETEG00000002811 | ||
Aliases: | None | ||
Description: | ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] |
Percent Identity: | 61.59 % |
Parental protein coverage: | 99.26 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | GKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTS-DRPYSHALVAGIDRYPRKVTAAM-GKKKIAKRSKIK |
GKFMKP.KVVLVL....SG.K..IV.NID..T..D.PYSH.L.AGI..YP.KVTA.M.G........K.. | |
Retrocopy | GKFMKP*KVVLVLTRHCSGCKVIIVVNIDNSTQ<DHPYSHSLMAGIECYPHKVTASM<GQEENCQMVKNQ |
Parental | SFVK-VYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF |
.F....Y....L.PT.Y.VDIPLDKTV.NKDVFRD.ALK.KA...AK.KFEE.YK.GKNKWFFQKL.F | |
Retrocopy | VFCECLYL*FYLIPTSYAVDIPLDKTVINKDVFRDLALKCKASKKAKFKFEEKYKKGKNKWFFQKLLF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |