RetrogeneDB ID: | retro_mluc_2130 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430052:374643..375184(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000029936 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS3A | ||
Ensembl ID: | ENSMLUG00000014788 | ||
Aliases: | None | ||
Description: | ribosomal protein S3A [Source:HGNC Symbol;Acc:10421] |
Percent Identity: | 68.85 % |
Parental protein coverage: | 68.56 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | LTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK-GRVFEVSLADLQND |
L...G..G..K..........WYDVKAPAMFN.RN.GKTLVTR.Q.T..ASDGLK.GRV.EVSLAD.QN. | |
Retrocopy | LSSTGAVGKNKCNRGSQEESGWYDVKAPAMFNTRNSGKTLVTRAQETESASDGLK<GRVLEVSLADPQNH |
Parental | EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVK-KWQTMIEAHVDVKTTDGYLLRLFCVGFTKKR |
E.AFRK.KLI.E.VQG..CL..F.G.DLT.D.MCSMVK.KWQTMIEAHV.VKTT.G.L...FCVGFTKK. | |
Retrocopy | EGAFRKLKLIAEEVQGATCLIHFRGVDLTSDQMCSMVK<KWQTMIEAHVHVKTTGGPLFCRFCVGFTKKH |
Parental | NNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLI |
.N.I.KTSYAQHQQ.R.IRKKMM.IMTREVQTNDL.EVV...I | |
Retrocopy | SNPIQKTSYAQHQQARHIRKKMMKIMTREVQTNDLREVVSTRI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |