RetrogeneDB ID: | retro_tsyr_2148 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_96077:2663..3108(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000011824 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSTSYG00000012564 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 87.92 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGT-VMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL |
AD.LTE..IAE.K.AFSLFDKDGDGTITTKELGT.VMRSLG.NP.EA.LQ..I.EVDADGNGTIDFPEF. | |
Retrocopy | ADRLTEGPIAECKDAFSLFDKDGDGTITTKELGT>VMRSLGPNPAEAALQNRIDEVDADGNGTIDFPEFF |
Parental | TMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE |
TM.ARKMKD.DSEEEIREAFRVFDKDGNGY.SAAELRHVMTN.GEKLTDEEVDEMIREADIDGDG.VNYE | |
Retrocopy | TMVARKMKDADSEEEIREAFRVFDKDGNGYSSAAELRHVMTNSGEKLTDEEVDEMIREADIDGDGRVNYE |
Parental | EFVQMMTAK |
EFVQMMTAK | |
Retrocopy | EFVQMMTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |