RetrogeneDB ID: | retro_chof_2261 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_6179:16251..16577(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSCHOG00000008245 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 87.27 % |
Parental protein coverage: | 73.65 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GQNPTEAELQDMINEVDADGNGTIDFPEFLT-MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHV |
G.NPTEAELQDMINEVDADGNGT.DFPEFLT.MMARKM.DTDSEEEI..A..VFDKDGNGYISAAEL.HV | |
Retrocopy | G*NPTEAELQDMINEVDADGNGTTDFPEFLT<MMARKMNDTDSEEEIHKAL*VFDKDGNGYISAAELCHV |
Parental | MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK |
MTNLGEKLTDEEVDEMI..ADIDGDGQVN.EEF.QMM.AK | |
Retrocopy | MTNLGEKLTDEEVDEMIGKADIDGDGQVNFEEFIQMMNAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |