RetrogeneDB ID: | retro_pvam_560 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_3753:68894..69299(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSPVAG00000005183 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 85.19 % |
Parental protein coverage: | 90.6 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE |
E.FSLFDKD..GT..TKEL.TVM.SLGQN.TEAEL.DMINE.DADGN.TIDFPEFLT.MARKMKDTDSEE | |
Retrocopy | EVFSLFDKDDVGTMATKELETVMKSLGQNLTEAEL*DMINEMDADGNSTIDFPEFLTIMARKMKDTDSEE |
Parental | EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK |
EIREA..VFDKDGNGYI.AAEL.HVMTNLG.KLTDEEVDEMIREADIDGDGQVNY.EF.QMMTA. | |
Retrocopy | EIREAYHVFDKDGNGYIRAAELHHVMTNLGGKLTDEEVDEMIREADIDGDGQVNYKEFAQMMTAQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |