RetrogeneDB ID: | retro_chof_367 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_100583:2780..3159(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000002429 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSCHOG00000008245 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 70.54 % |
Parental protein coverage: | 85.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | FDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI-R |
F.KDGDGTIT.KELG.V.R.......T..ELQD.I.E.DA.G.G...F.EFLTMMARK.KD.DSEEE..R | |
Retrocopy | FGKDGDGTITAKELGAVRR<AAASEATGVELQDVIDEADAGGDGSMGFQEFLTMMARKVKDMDSEEEV<R |
Parental | EAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM |
EAFRV..KDG.G.IS.AE.RHV.TNLGE.L..EEVDEMIREAD.DGDGQVNYEEFV.MM | |
Retrocopy | EAFRVLGKDGDGCISVAEQRHVLTNLGESLSGEEVDEMIREADVDGDGQVNYEEFVRMM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |