RetrogeneDB ID: | retro_chof_965 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_176804:461..905(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSCHOG00000008245 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 98.65 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT |
ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT.AELQDMINEVDADGNGTIDFPEFLT | |
Retrocopy | ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPT*AELQDMINEVDADGNGTIDFPEFLT |
Parental | MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE |
MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL.HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE | |
Retrocopy | MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELCHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE |
Parental | FVQMMTAK |
FVQMMTAK | |
Retrocopy | FVQMMTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |