RetrogeneDB ID: | retro_chof_735 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_142001:2404..2838(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CALM2 | ||
Ensembl ID: | ENSCHOG00000008245 | ||
Aliases: | None | ||
Description: | calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445] |
Percent Identity: | 82.19 % |
Parental protein coverage: | 97.97 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI-DFPEFLTMM |
L.EE.IAEF.EAFSLF.KDG.GTITTKELGT.MRSLGQNPT..ELQDMINEVDADG.....DF.EFLT.M | |
Retrocopy | LNEEKIAEFREAFSLFYKDGNGTITTKELGTIMRSLGQNPTKVELQDMINEVDADGYDNL<DFLEFLTVM |
Parental | ARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV |
.RKMKDTD.EEEI.EAF.VF.KDGNG.I.AAEL.HVMTNLGEKLTDEE.DEMIREA.I.GDGQVNYEEFV | |
Retrocopy | IRKMKDTDGEEEIIEAFHVFGKDGNG*IGAAELCHVMTNLGEKLTDEETDEMIREANIYGDGQVNYEEFV |
Parental | QMMTAK |
QMMTAK | |
Retrocopy | QMMTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |