Parental gene: | Rpl31, ENSMUSG00000073702 |
| Aliases: | None |
| Description: | ribosomal protein L31 [Source:MGI Symbol;Acc:MGI:2149632] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:39367850..39371908(+) |
>ENSMUSG00000073702
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCA
TGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTT
CCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAAC
TTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAA
ATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAGAAGGGCCGTTCTGCCATCAACGAGGTGGTGACCCGAGAATACACCAT
CAACATTCACAAGCGCATCCATGGAGTGGGCTTCAAGAAGCGTGCTCCTCGGGCACTCAAAGAAATTCGGAAGTTTGCCA
TGAAGGAAATGGGGACACCAGATGTGCGCATTGACACCAGGCTCAATAAAGCCGTCTGGGCCAAGGGAATAAGGAACGTT
CCATATCGCATCCGAGTACGCTTGTCCAGAAAACGTAATGAGGATGAGGATTCCCCAAACAAGCTCTACACGCTGGTAAC
TTACGTGCCTGTTACCACATTCAAAAATCTACAGACGGTCAACGTGGATGAGAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 69 .15 RPM |
| SRP007412_cerebellum | 44 .55 RPM |
| SRP007412_heart | 65 .62 RPM |
| SRP007412_kidney | 77 .00 RPM |
| SRP007412_liver | 55 .14 RPM |
| SRP007412_testis | 58 .23 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019701 | possible_ortholog | 9 retrogenes | |
| Latimeria chalumnae | ENSLACG00000013603 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000000963 | ortholog_one2one | 8 retrogenes | |
| Microcebus murinus | ENSMICG00000016059 | ortholog_one2one | 15 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002507 | possible_ortholog | 21 retrogenes |
retro_mluc_1072, retro_mluc_1135, retro_mluc_1239, retro_mluc_1301, retro_mluc_1406, retro_mluc_1470, retro_mluc_1666, retro_mluc_1678, retro_mluc_1896, retro_mluc_1913, retro_mluc_2028, retro_mluc_2124, retro_mluc_2126, retro_mluc_269, retro_mluc_303, retro_mluc_463, retro_mluc_767, retro_mluc_782, retro_mluc_914, retro_mluc_922, retro_mluc_997,
|
| Oryctolagus cuniculus | ENSOCUG00000002392 | ortholog_one2one | 9 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_367 | 69.60 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_396 | 78.74 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_446 | 80.34 | 92.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_453 | 97.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_485 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_592 | 73.81 | 66.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_933 | 96.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_964 | 93.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_1054 | 96.80 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_1143 | 83.33 | 99.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmus_1256 | 79.20 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mmus_1419 | 100.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_mmus_1456 | 59.62 | 83.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_mmus_1495 | 98.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_mmus_1507 | 50.48 | 81.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_mmus_1532 | 83.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_mmus_1598 | 89.68 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_mmus_1670 | 73.73 | 94.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_mmus_1674 | 60.71 | 66.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_mmus_1768 | 69.57 | 91.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_mmus_1823 | 93.60 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_mmus_1836 | 88.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_mmus_1856 | 62.89 | 74.40 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_mmus_2054 | 58.68 | 96.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_mmus_2152 | 92.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_mmus_2240 | 66.67 | 96.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_mmus_2278 | 97.62 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_mmus_2398 | 96.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 29. | retro_mmus_2554 | 71.30 | 89.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 30. | retro_mmus_2603 | 82.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 31. | retro_mmus_2620 | 82.47 | 76.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 32. | retro_mmus_2630 | 79.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 33. | retro_mmus_2658 | 82.20 | 93.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 34. | retro_mmus_2677 | 79.12 | 72.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 35. | retro_mmus_2716 | 72.36 | 97.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 36. | retro_mmus_2821 | 88.10 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 37. | retro_mmus_2959 | 69.52 | 83.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 38. | retro_mmus_2966 | 69.23 | 81.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 39. | retro_mmus_3186 | 85.71 | 95.20 | Please wait, loading | Please wait, loading | Please wait, loading |
| 40. | retro_mmus_3196 | 68.00 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 41. | retro_mmus_3380 | 84.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000073702 retrocopies