Parental gene: | UBE2D2, ENSPPYG00000015844 |
| Aliases: | None |
| Description: | ubiquitin-conjugating enzyme E2D 2 [Source:HGNC Symbol;Acc:12475] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:141121722..141192782(+) |
>ENSPPYG00000015844
ATGGCTCTGAAGAGAATCCACAAGGAATTGAATGATCTGGCACGGGACCCTCCAGCACAGTGTTCAGCAGGTCCTGTTGG
AGATGATATGTTCCATTGGCAAGCTACAATAATGGGGCCAAATGACAGTCCCTATCAGGGTGGAGTATTTTTCTTGACAA
TTCATTTCCCAACAGATTACCCCTTCAAACCACCTAAGGTTGCATTTACAACAAGAATTTATCATCCAAATATAAACAGT
AATGGCAGCATTTGTCTTGATATTCTACGGTCACAGTGGTCTCCAGCACTAACTATTTCAAAAGTACTCTTGTCCATCTG
TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTTAGTGCCTGAGATTGCTCGGATCTACAAAACAGATAGAGAAAAGT
ACAACAGAATAGCTCGGGAATGGACTCAGAAGTATGCGATGTAA
ATGGCTCTGAAGAGAATCCACAAGGAATTGAATGATCTGGCACGGGACCCTCCAGCACAGTGTTCAGCAGGTCCTGTTGG
AGATGATATGTTCCATTGGCAAGCTACAATAATGGGGCCAAATGACAGTCCCTATCAGGGTGGAGTATTTTTCTTGACAA
TTCATTTCCCAACAGATTACCCCTTCAAACCACCTAAGGTTGCATTTACAACAAGAATTTATCATCCAAATATAAACAGT
AATGGCAGCATTTGTCTTGATATTCTACGGTCACAGTGGTCTCCAGCACTAACTATTTCAAAAGTACTCTTGTCCATCTG
TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTTAGTGCCTGAGATTGCTCGGATCTACAAAACAGATAGAGAAAAGT
ACAACAGAATAGCTCGGGAATGGACTCAGAAGTATGCGATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 23 .00 RPM |
| SRP007412_cerebellum | 17 .27 RPM |
| SRP007412_heart | 13 .00 RPM |
| SRP007412_kidney | 16 .57 RPM |
| SRP007412_liver | 11 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000002183 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000011216 | ortholog_one2one | 6 retrogenes | |
| Bos taurus | ENSBTAG00000004161 | ortholog_one2one | 6 retrogenes | |
| Canis familiaris | ENSCAFG00000031041 | ortholog_one2one | 5 retrogenes | |
| Ciona intestinalis | ENSCING00000018711 | ortholog_many2many | 2 retrogenes | |
| Ciona savignyi | ENSCSAVG00000006136 | ortholog_many2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000014658 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000001291 | possible_ortholog | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000001368 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000006878 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000020666 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000011783 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000009110 | ortholog_one2one | 5 retrogenes | |
| Mus musculus | ENSMUSG00000091896 | ortholog_one2one | 3 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000005415 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029448 | ortholog_one2one | 10 retrogenes | |
| Pongo abelii | ENSPPYG00000011602 | within_species_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012987 | other_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014967 | within_species_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029727 | within_species_paralog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017303 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000015438 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000013481 | possible_ortholog | 6 retrogenes | |
| Tupaia belangeri | ENSTBEG00000000270 | possible_ortholog | 5 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005459 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_30 | 69.33 | 51.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1016 | 53.98 | 76.19 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1164 | 69.62 | 53.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1257 | 55.66 | 69.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2330 | 82.00 | 67.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_3670 | 65.44 | 89.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015844 retrocopies