Parental gene:

Ube2d2a, ENSMUSG00000091896

Aliases:Ube2d2a, 1500034D03Rik, Ubc2e, Ube2d2, ubc4
Description:ubiquitin-conjugating enzyme E2D 2A [Source:MGI Symbol;Acc:MGI:1930715]
Organism:Mouse (Mus musculus)
Coordinates:18:35771558..35807172(+)


>ENSMUSG00000091896
ATGGCTCTGAAGAGAATCCACAAGGAATTGAATGACCTGGCTCGAGATCCCCCAGCACAGTGTTCAGCAGGTCCTGTTGG
AGATGATATGTTTCATTGGCAGGCTACAATAATGGGGCCAAATGACAGCCCCTATCAGGGTGGAGTATTTTTCTTGACAA
TTCATTTCCCAACAGATTACCCCTTCAAACCGCCTAAGGTTGCATTTACAACAAGAATTTATCACCCAAATATTAACAGT
AATGGCAGCATTTGTCTTGATATTCTACGGTCACAGTGGTCTCCAGCACTAACTATTTCAAAAGTACTTTTGTCCATCTG
TTCTCTGTTGTGTGATCCCAATCCAGATGATCCTTTAGTGCCTGAGATTGCTCGGATCTACAAAACAGATAGAGAAAAGT
ACAACAGAATAGCTCGGGAATGGACTCAGAAGTATGCGATGTAA

Library Parental gene expression (RPM)
SRP007412_brain 38 .27 RPM
SRP007412_cerebellum 22 .06 RPM
SRP007412_heart 16 .09 RPM
SRP007412_kidney 21 .16 RPM
SRP007412_liver 13 .82 RPM
SRP007412_testis 22 .55 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002183 ortholog_one2one 1 retrogene
retro_acar_182,
Ailuropoda melanoleuca ENSAMEG00000011216 ortholog_one2one 6 retrogenes
retro_amel_1295, retro_amel_1427, retro_amel_1648, retro_amel_1750, retro_amel_620, retro_amel_995,
Bos taurus ENSBTAG00000004161 ortholog_one2one 6 retrogenes
retro_btau_1421, retro_btau_1602, retro_btau_1739, retro_btau_1775, retro_btau_1851, retro_btau_1852,
Canis familiaris ENSCAFG00000031041 ortholog_one2one 5 retrogenes
retro_cfam_1191, retro_cfam_1439, retro_cfam_1602, retro_cfam_2034, retro_cfam_785,
Ciona intestinalis ENSCING00000018711 ortholog_many2many 2 retrogenes
retro_cint_19, retro_cint_29,
Ciona savignyi ENSCSAVG00000006136 ortholog_many2many 1 retrogene
retro_csav_18,
Erinaceus europaeus ENSEEUG00000014658 possible_ortholog 3 retrogenes
retro_eeur_263, retro_eeur_566, retro_eeur_591,
Echinops telfairi ENSETEG00000001291 possible_ortholog 3 retrogenes
retro_etel_1218, retro_etel_1998, retro_etel_36,
Gorilla gorilla ENSGGOG00000001368 possible_ortholog 2 retrogenes
retro_ggor_1156, retro_ggor_2321,
Loxodonta africana ENSLAFG00000006878 ortholog_one2one 2 retrogenes
retro_lafr_288, retro_lafr_290,
Macaca mulatta ENSMMUG00000020666 ortholog_one2one 3 retrogenes
retro_mmul_1298, retro_mmul_2143, retro_mmul_2246,
Monodelphis domestica ENSMODG00000011783 ortholog_one2one 2 retrogenes
retro_mdom_17, retro_mdom_884,
Mustela putorius furo ENSMPUG00000009110 ortholog_one2one 5 retrogenes
retro_mputfur_1263, retro_mputfur_1637, retro_mputfur_263, retro_mputfur_682, retro_mputfur_703,
Mus musculus ENSMUSG00000019927 within_species_paralog 22 retrogenes
retro_mmus_3405, retro_mmus_3406, retro_mmus_3407, retro_mmus_3409, retro_mmus_3430, retro_mmus_3432, retro_mmus_3434, retro_mmus_3435, retro_mmus_3436, retro_mmus_3563, retro_mmus_3564, retro_mmus_3565, retro_mmus_3566, retro_mmus_3567, retro_mmus_3587, retro_mmus_3589, retro_mmus_3590, retro_mmus_3591, retro_mmus_3592, retro_mmus_3593, retro_mmus_3594, retro_mmus_3595,
Mus musculus ENSMUSG00000021774 other_paralog 3 retrogenes
retro_mmus_2493, retro_mmus_2600, retro_mmus_537,
Mus musculus ENSMUSG00000027011 other_paralog 4 retrogenes
retro_mmus_2814, retro_mmus_3123, retro_mmus_3416, retro_mmus_3571,
Mus musculus ENSMUSG00000038965 within_species_paralog 10 retrogenes
retro_mmus_1619, retro_mmus_1620, retro_mmus_2147, retro_mmus_2212, retro_mmus_2272, retro_mmus_2315, retro_mmus_3205, retro_mmus_3714, retro_mmus_541, retro_mmus_995,
Mus musculus ENSMUSG00000078578 within_species_paralog 11 retrogenes
retro_mmus_1818, retro_mmus_1895, retro_mmus_1913, retro_mmus_2293, retro_mmus_2635, retro_mmus_2643, retro_mmus_3119, retro_mmus_3636, retro_mmus_850, retro_mmus_875, retro_mmus_923,
Ornithorhynchus anatinus ENSOANG00000005415 possible_ortholog 1 retrogene
retro_oana_51,
Oryctolagus cuniculus ENSOCUG00000029448 ortholog_one2one 10 retrogenes
retro_ocun_1220, retro_ocun_1426, retro_ocun_1536, retro_ocun_1660, retro_ocun_1856, retro_ocun_1941, retro_ocun_261, retro_ocun_467, retro_ocun_887, retro_ocun_988,
Pongo abelii ENSPPYG00000015844 ortholog_one2one 6 retrogenes
retro_pabe_1016, retro_pabe_1164, retro_pabe_1257, retro_pabe_2330, retro_pabe_30, retro_pabe_3670,
Pan troglodytes ENSPTRG00000017303 ortholog_one2one 3 retrogenes
retro_ptro_26, retro_ptro_3141, retro_ptro_341,
Pteropus vampyrus ENSPVAG00000015438 possible_ortholog 1 retrogene
retro_pvam_234,
Ictidomys tridecemlineatus ENSSTOG00000013481 possible_ortholog 6 retrogenes
retro_itri_1222, retro_itri_1474, retro_itri_1628, retro_itri_463, retro_itri_672, retro_itri_998,
Tupaia belangeri ENSTBEG00000000270 possible_ortholog 5 retrogenes
retro_tbel_1336, retro_tbel_145, retro_tbel_1837, retro_tbel_262, retro_tbel_3134,
Tarsius syrichta ENSTSYG00000005459 ortholog_one2one 1 retrogene
retro_tsyr_1421,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_27 92.52 100.00
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2. retro_mmus_629 87.31 90.48
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3. retro_mmus_2267 100.00 100.00
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Download FASTA sequences of all ENSMUSG00000091896 retrocopies