RetrogeneDB ID: | retro_etel_1218 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_230256:6771..7107(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000001291 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.07 % |
Parental protein coverage: | 80.58 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | GDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPA |
G.DMFHWQ.TIMG.NDS.YQGG..FL.IHF.T.YPF..PKVAF...IYHP.IN....I..DIL.SQWS.A | |
Retrocopy | GNDMFHWQVTIMGSNDSAYQGGIYFLKIHFQTVYPFQSPKVAFASTIYHPKINNSSNIYPDILLSQWSLA |
Parental | LTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIA |
...SKV.LSI.SLLCD.NPDDP.VP..A.IY..DR.K.NR.A | |
Retrocopy | PSTSKVILSI*SLLCDSNPDDPRVPKTAEIYERDRAKFNRVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |