RetrogeneDB - Parental gene ENSSTOG00000002077 details

                            
>ENSSTOG00000002077
ATGAAGACCATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATTACTCTGAAGGGACGCACAGTTATTGT

GAAGGGCCCAAGAGGAACCCTCCGGAGGGATTTCAATCATATCAATGTGGAACTCAGCCTCCTTGGAAAGAAAAAGAAGA

GGCTACGTGTTGACAAATGGTGGGGAAATAGAAAGGAACTGGCCACTGTTCGCACCATCTGTAGTCATGTACAGAACATG

ATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATTCAGGA

GAATGGGTCTCTCGTTGAAATCCGAAATTTCTTGGGTGAAAAATATATCCGCAGGGTTCGGATGAGGACAGGTGTTGCTT

GTTCAGTGTCTCAAGCTCAGAAAGATGAATTAATCCTTGAAGGAAATGATATTGAACTTGTTTCAAATTCAGCCGCTTTA

ATTCAGCAAGCCACAACAGTGAAAAACAAGGATATCAGAAAATTTTTGGATGGTATTTATGTTTCTGAAAAAGGAACAGT

TCAACAGGCTGATGAATAA

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000007317	ortholog_one2one	1 retrogene	retro_acar_163,
Cavia porcellus	ENSCPOG00000004543	ortholog_one2one	15 retrogenes	retro_cpor_1037, retro_cpor_1160, retro_cpor_1264, retro_cpor_1400, retro_cpor_1483, retro_cpor_182, retro_cpor_346, retro_cpor_354, retro_cpor_395, retro_cpor_472, retro_cpor_530, retro_cpor_565, retro_cpor_628, retro_cpor_665, retro_cpor_684,
Danio rerio	ENSDARG00000037350	ortholog_one2one	1 retrogene	retro_drer_18,
Dasypus novemcinctus	ENSDNOG00000007411	possible_ortholog	18 retrogenes	retro_dnov_1298, retro_dnov_1560, retro_dnov_1684, retro_dnov_1845, retro_dnov_1877, retro_dnov_1936, retro_dnov_2148, retro_dnov_2277, retro_dnov_2624, retro_dnov_2659, retro_dnov_282, retro_dnov_407, retro_dnov_437, retro_dnov_450, retro_dnov_615, retro_dnov_787, retro_dnov_82, retro_dnov_975,
Dipodomys ordii	ENSDORG00000001088	ortholog_one2one	6 retrogenes	retro_dord_276, retro_dord_42, retro_dord_435, retro_dord_604, retro_dord_637, retro_dord_718,
Erinaceus europaeus	ENSEEUG00000004394	possible_ortholog	39 retrogenes	retro_eeur_11, retro_eeur_136, retro_eeur_153, retro_eeur_162, retro_eeur_184, retro_eeur_191, retro_eeur_229, retro_eeur_246, retro_eeur_27, retro_eeur_279, retro_eeur_280, retro_eeur_282, retro_eeur_296, retro_eeur_307, retro_eeur_352, retro_eeur_383, retro_eeur_399, retro_eeur_410, retro_eeur_429, retro_eeur_433, retro_eeur_449, retro_eeur_453, retro_eeur_461, retro_eeur_471, retro_eeur_486, retro_eeur_493, retro_eeur_51, retro_eeur_540, retro_eeur_572, retro_eeur_590, retro_eeur_599, retro_eeur_600, retro_eeur_619, retro_eeur_624, retro_eeur_65, retro_eeur_670, retro_eeur_678, retro_eeur_68, retro_eeur_98,
Gadus morhua	ENSGMOG00000001002	ortholog_one2one	1 retrogene	retro_gmor_28,
Macropus eugenii	ENSMEUG00000016722	ortholog_one2many	8 retrogenes	retro_meug_1087, retro_meug_1411, retro_meug_1961, retro_meug_22, retro_meug_440, retro_meug_490, retro_meug_650, retro_meug_763,
Myotis lucifugus	ENSMLUG00000004597	possible_ortholog	34 retrogenes	retro_mluc_1028, retro_mluc_1029, retro_mluc_1261, retro_mluc_1269, retro_mluc_127, retro_mluc_1320, retro_mluc_1368, retro_mluc_1380, retro_mluc_1572, retro_mluc_1655, retro_mluc_1704, retro_mluc_1757, retro_mluc_1813, retro_mluc_1858, retro_mluc_1880, retro_mluc_1983, retro_mluc_2041, retro_mluc_2067, retro_mluc_2112, retro_mluc_2119, retro_mluc_220, retro_mluc_2229, retro_mluc_223, retro_mluc_2230, retro_mluc_2370, retro_mluc_2428, retro_mluc_2495, retro_mluc_2611, retro_mluc_293, retro_mluc_461, retro_mluc_533, retro_mluc_648, retro_mluc_75, retro_mluc_895,
Monodelphis domestica	ENSMODG00000020553	ortholog_one2one	7 retrogenes	retro_mdom_1026, retro_mdom_1078, retro_mdom_1261, retro_mdom_1352, retro_mdom_1414, retro_mdom_401, retro_mdom_637,
Mus musculus	ENSMUSG00000047215	ortholog_one2many	2 retrogenes	retro_mmus_262, retro_mmus_81,
Otolemur garnettii	ENSOGAG00000004935	possible_ortholog	20 retrogenes	retro_ogar_117, retro_ogar_1223, retro_ogar_1471, retro_ogar_1614, retro_ogar_1694, retro_ogar_1807, retro_ogar_1884, retro_ogar_1906, retro_ogar_1933, retro_ogar_2162, retro_ogar_2173, retro_ogar_2806, retro_ogar_3036, retro_ogar_3115, retro_ogar_3276, retro_ogar_329, retro_ogar_429, retro_ogar_864, retro_ogar_886, retro_ogar_963,
Rattus norvegicus	ENSRNOG00000026716	ortholog_one2many	3 retrogenes	retro_rnor_237, retro_rnor_310, retro_rnor_332,
Sarcophilus harrisii	ENSSHAG00000004918	ortholog_one2one	8 retrogenes	retro_shar_191, retro_shar_192, retro_shar_236, retro_shar_340, retro_shar_359, retro_shar_406, retro_shar_600, retro_shar_607,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_itri_305	86.46	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_itri_313	85.05	100.00	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_itri_339	60.23	89.58	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_itri_392	56.20	61.98	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_itri_588	56.57	50.52	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_itri_663	66.95	60.42	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_itri_838	79.61	76.56	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_itri_908	84.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_itri_914	55.56	64.06	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_itri_956	55.10	51.04	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_itri_1106	80.31	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_itri_1182	73.39	55.21	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_itri_1328	91.23	59.38	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSSTOG00000002077 retrocopies

Parental gene:	RPL9, ENSSTOG00000002077
Aliases:	None
Description:	ribosomal protein L9 [Source:HGNC Symbol;Acc:10369]
Organism:	*Squirrel (Ictidomys tridecemlineatus)*
Coordinates:	JH393292.1:7063921..7068252(-)

Parental gene:

RPL9, ENSSTOG00000002077