RetrogeneDB ID: | retro_dord_435 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_185354:772..1087(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000001088 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 65.42 % |
Parental protein coverage: | 54.69 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | CSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRTGVACSVSQAQKDE |
C..V.N....V.LGF.YKMRS..AHFPI..V..EN.SLVEI.NFLGEKYI.RV..R..VAC.V.Q.QKDE | |
Retrocopy | CRYVHNTTASVPLGFHYKMRSGCAHFPIYIVTRENESLVEIQNFLGEKYIHRVCIRKDVACPVTQSQKDE |
Parental | LILEGND-IELVSNSAALIQQATTVK-NKDIRKFLDG |
.IL..ND..ELVSN..ALIQQATTV..NK.IRK..DG | |
Retrocopy | FILKRND>VELVSNPGALIQQATTVQ<NKAIRKMWDG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |