RetrogeneDB ID: | retro_itri_1328 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393442.1:1467313..1467655(+) | ||
Located in intron of: | ENSSTOG00000013429 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL9 | ||
Ensembl ID: | ENSSTOG00000002077 | ||
Aliases: | None | ||
Description: | ribosomal protein L9 [Source:HGNC Symbol;Acc:10369] |
Percent Identity: | 91.23 % |
Parental protein coverage: | 59.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATV |
MKTILSNQTVD.PENVDI.LKG.TVIVKGPRGTL.RDFNHINVELSLLGKKKK.LRV.KWWGNRKELATV | |
Retrocopy | MKTILSNQTVDSPENVDIALKGCTVIVKGPRGTL*RDFNHINVELSLLGKKKKKLRVEKWWGNRKELATV |
Parental | RTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEI |
RTICSHVQN.IKGVTL.FRYKMRSVYAH.PIN.VIQENGSLVEI | |
Retrocopy | RTICSHVQNTIKGVTLDFRYKMRSVYAHIPINIVIQENGSLVEI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |