RetrogeneDB ID: | retro_chof_450 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_11057:3863..4084(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSCHOG00000009158 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 78.67 % |
Parental protein coverage: | 80.43 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | NLIFRYLQNRSRIQVWLYEQVNMRIEGCII-GFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLL |
N.IFR.LQNRSRIQVWLYEQ.NM.I.GC...GFDEYMN..LD.AEEI.SKTKSRKQLGRIMLKG...TLL | |
Retrocopy | NPIFRSLQNRSRIQVWLYEQANMLIDGCLE<GFDEYMNFILDSAEEIDSKTKSRKQLGRIMLKGGITTLL |
Parental | QSVSN |
QSVS. | |
Retrocopy | QSVSH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |