RetrogeneDB ID: | retro_mmur_1406 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_55088:1572..1847(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSMICG00000015537 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 74.19 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAYRGQGQKVQK-VMVQPIXXXXXXXXXRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTK |
M.Y..QG.KVQ..V.VQPI.........RSR..VWLYEQV.MRIEGCIIGFDE...LVLD.AEEIHSKTK | |
Retrocopy | MVYLCQGWKVQR<VTVQPIKLIFRYLQNRSRFPVWLYEQVTMRIEGCIIGFDEFTDLVLDNAEEIHSKTK |
Parental | SRKQLGRIMLKGDNITLLQSVSN |
SRKQLG.IMLKGDNITLLQSVSN | |
Retrocopy | SRKQLGWIMLKGDNITLLQSVSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |