RetrogeneDB ID: | retro_pvam_1364 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_6985:67234..67640(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS4X | ||
Ensembl ID: | ENSPVAG00000012882 | ||
Aliases: | None | ||
Description: | ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] |
Percent Identity: | 66.67 % |
Parental protein coverage: | 51.71 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL-TGDEVKKICMQRF |
MA.GPKKHLK.VAAP.H..LD.L...FAP.PST..HKLRE.LP.I.FLRNRLKYA..T.D..K.I....F | |
Retrocopy | MAYGPKKHLKCVAAPEH*ILDELANIFAPCPSTDSHKLREYLPVILFLRNRLKYAR<TEDKIKEIYIWLF |
Parental | IKIDGKVRTDVTYPAGFMDVISIDKTGENFRLVYDTKGRFAVHRITTEEAKYKLCKVRKI-FVGTKGI |
IKID.KV.T...YP.GFMD.ISIDKT..N..L.YDTK..FAVH..T..EA..KLCKVRKI.FVGTKGI | |
Retrocopy | IKIDSKV*TNIIYPDGFMDGISIDKTRKNSCLIYDTKDCFAVHCMTAKEATCKLCKVRKI<FVGTKGI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |