Parental gene:

RPS4X, ENSPVAG00000012882

Aliases:None
Description:ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424]
Organism:Megabat (Pteropus vampyrus)
Coordinates:scaffold_13073:28371..32777(-)


>ENSPVAG00000012882
ATGGCTCGTGGTCCCAAGAAGCATCTGAAGCGAGTAGCAGCTCCGAAGCACTGGATGCTGGATAAACTGACGGGTGTGTT
TGCTCCTCGTCCTTCTACCGGCCCCCATAAGCTGAGAGAGTGTCTTCCTCTCATCATTTTCTTAAGGAACAGACTGAAGT
ATGCCCTGACGGGAGATGAAGTAAAGAAGATCTGCATGCAGCGCTTTATCAAGATCGATGGCAAGGTCCGCACTGACGTG
ACCTACCCTGCTGGCTTTATGGATGTCATCAGCATTGACAAGACCGGAGAGAATTTCCGTCTCGTCTATGACACCAAAGG
TCGCTTCGCTGTTCATCGGATTACAACTGAGGAGGCCAAGTACAAGTTGTGCAAAGTGAGAAAAATCTTTGTGGGCACAA
AAGGAATCCCTCATCTGGTGACTCACGATGCTCGCACCATCCGCTACCCCGACCCCCTCATCAAAGTGAACGACACCATT
CAGATTGATTTGGAGACTGGCAAAATTACCGATTTCATCAAGTTTGACACCGGTAACCTGTGCATGGTGACCGGAGGTGC
TAACTTGGGAAGAATCGGCGTGATCACCAACAGAGAGAGACACCCTGGTTCTTTCGACGTGGTTCATGTGAAAGACGCCA
ACGGCAACAGCTTTGCCACCCGGCTCTCCAACATTTTCGTTATTGGCAAAGGCAACAAACCGTGGATTTCTCTTCCCCGT
GGCAAGGGGATCCGACTCACCATCGCCGAAGAGAGAGACAAGAGACTGGCGGCCAAACAGAGCAGCGGGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014601 ortholog_one2one 1 retrogene
retro_acar_82,
Ailuropoda melanoleuca ENSAMEG00000005805 possible_ortholog 14 retrogenes
retro_amel_1003, retro_amel_1128, retro_amel_1296, retro_amel_1381, retro_amel_1695, retro_amel_1869, retro_amel_195, retro_amel_259, retro_amel_327, retro_amel_576, retro_amel_767, retro_amel_869, retro_amel_968, retro_amel_971,
Bos taurus ENSBTAG00000018800 possible_ortholog 5 retrogenes
retro_btau_119, retro_btau_125, retro_btau_146, retro_btau_33, retro_btau_76,
Canis familiaris ENSCAFG00000017151 possible_ortholog 2 retrogenes
retro_cfam_165, retro_cfam_194,
Callithrix jacchus ENSCJAG00000004192 possible_ortholog 2 retrogenes
retro_cjac_19, retro_cjac_361,
Cavia porcellus ENSCPOG00000006337 possible_ortholog 3 retrogenes
retro_cpor_1023, retro_cpor_1075, retro_cpor_31,
Equus caballus ENSECAG00000010852 possible_ortholog 6 retrogenes
retro_ecab_34, retro_ecab_435, retro_ecab_443, retro_ecab_614, retro_ecab_757, retro_ecab_850,
Felis catus ENSFCAG00000012041 possible_ortholog 11 retrogenes
retro_fcat_1155, retro_fcat_1498, retro_fcat_1562, retro_fcat_1751, retro_fcat_1773, retro_fcat_2024, retro_fcat_229, retro_fcat_290, retro_fcat_454, retro_fcat_563, retro_fcat_766,
Homo sapiens ENSG00000129824 possible_ortholog 1 retrogene
retro_hsap_1704,
Gorilla gorilla ENSGGOG00000023079 possible_ortholog 18 retrogenes
retro_ggor_1278, retro_ggor_1319, retro_ggor_1354, retro_ggor_1367, retro_ggor_1478, retro_ggor_1479, retro_ggor_1517, retro_ggor_1520, retro_ggor_1689, retro_ggor_223, retro_ggor_2676, retro_ggor_2719, retro_ggor_572, retro_ggor_711, retro_ggor_844, retro_ggor_894, retro_ggor_895, retro_ggor_939,
Meleagris gallopavo ENSMGAG00000009671 ortholog_one2many 1 retrogene
retro_mgal_3,
Myotis lucifugus ENSMLUG00000011685 possible_ortholog 5 retrogenes
retro_mluc_1638, retro_mluc_2253, retro_mluc_301, retro_mluc_536, retro_mluc_736,
Macaca mulatta ENSMMUG00000003295 possible_ortholog 7 retrogenes
retro_mmul_1243, retro_mmul_1589, retro_mmul_1895, retro_mmul_1999, retro_mmul_2338, retro_mmul_43, retro_mmul_97,
Monodelphis domestica ENSMODG00000011070 possible_ortholog 1 retrogene
retro_mdom_238,
Mustela putorius furo ENSMPUG00000005294 possible_ortholog 11 retrogenes
retro_mputfur_1044, retro_mputfur_1176, retro_mputfur_1325, retro_mputfur_1326, retro_mputfur_1393, retro_mputfur_160, retro_mputfur_205, retro_mputfur_48, retro_mputfur_725, retro_mputfur_876, retro_mputfur_988,
Mus musculus ENSMUSG00000031320 possible_ortholog 13 retrogenes
retro_mmus_1092, retro_mmus_1686, retro_mmus_2052, retro_mmus_2197, retro_mmus_2487, retro_mmus_2541, retro_mmus_2916, retro_mmus_3025, retro_mmus_3702, retro_mmus_499, retro_mmus_797, retro_mmus_92, retro_mmus_987,
Otolemur garnettii ENSOGAG00000011808 ortholog_one2many 2 retrogenes
retro_ogar_121, retro_ogar_229,
Pongo abelii ENSPPYG00000020462 possible_ortholog 24 retrogenes
retro_pabe_1005, retro_pabe_1401, retro_pabe_1472, retro_pabe_1524, retro_pabe_1586, retro_pabe_1657, retro_pabe_1673, retro_pabe_1702, retro_pabe_1784, retro_pabe_1948, retro_pabe_2455, retro_pabe_2629, retro_pabe_2836, retro_pabe_2923, retro_pabe_3275, retro_pabe_3325, retro_pabe_340, retro_pabe_493, retro_pabe_579, retro_pabe_580, retro_pabe_679, retro_pabe_891, retro_pabe_921, retro_pabe_954,
Pan troglodytes ENSPTRG00000022025 possible_ortholog 9 retrogenes
retro_ptro_1280, retro_ptro_131, retro_ptro_1366, retro_ptro_1367, retro_ptro_1408, retro_ptro_2276, retro_ptro_3032, retro_ptro_728, retro_ptro_784,
Pan troglodytes ENSPTRG00000022470 possible_ortholog 1 retrogene
retro_ptro_1153,
Rattus norvegicus ENSRNOG00000003201 possible_ortholog 1 retrogene
retro_rnor_135,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_177 85.47 65.40
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_pvam_191 77.87 88.97
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_pvam_214 57.22 65.78
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_pvam_219 74.58 66.16
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_pvam_335 86.11 68.44
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_pvam_473 99.24 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_pvam_628 76.71 55.51
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_pvam_714 97.69 98.86
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_pvam_809 80.09 81.37
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_pvam_835 71.43 57.79
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_pvam_921 98.10 100.00
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_pvam_930 76.47 50.19
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_pvam_1021 83.65 99.24
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_pvam_1082 78.49 69.96
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_pvam_1158 64.32 74.52
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_pvam_1264 74.50 76.05
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_pvam_1298 79.92 90.87
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_pvam_1312 75.50 76.05
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_pvam_1327 99.12 85.93
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_pvam_1364 66.67 51.71
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_pvam_1419 83.33 77.57
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPVAG00000012882 retrocopies