RetrogeneDB ID: | retro_ogar_750 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873527.1:5958068..5958295(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPE | ||
Ensembl ID: | ENSOGAG00000004309 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:11161] |
Percent Identity: | 72.73 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAYRGQGQKVQK-VMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTK |
.AY.GQGQKVQ..VMVQPINLIFR.L.NR.R.Q.W.Y.QV.M...GCI.G.DEY.N.VLDDAEEIHSKTK | |
Retrocopy | LAYCGQGQKVQR<VMVQPINLIFRHL*NRPRVQLWFYHQVDMWMKGCITGVDEYKNFVLDDAEEIHSKTK |
Parental | SRKQLGK |
SR.QLG. | |
Retrocopy | SRRQLGR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |