Parental gene:

RARRES2, ENSG00000106538

Aliases:RARRES2, HP10433, TIG2
Description:retinoic acid receptor responder (tazarotene induced) 2 [Source:HGNC Symbol;Acc:9868]
Organism:Human (Homo sapiens)
Coordinates:7:150035407..150038763(-)


>ENSG00000106538
ATGCGACGGCTGCTGATCCCTCTGGCCCTGTGGCTGGGTGCGGTGGGCGTGGGCGTCGCCGAGCTCACGGAAGCCCAGCG
CCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTTCCAGGAGACCAGTGTGGAGA
GCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTTAAGCTGCAGCAGACAAGCTGCCGGAAGAGG
GACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGAGGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGA
GGACAAAGTTCTGGGCCGGTTGGTCCACTGCCCCATAGAGACCCAAGTTCTGCGGGAGGCTGAGGAGCACCAGGAGACCC
AGTGCCTCAGGGTGCAGCGGGCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTG
CCCCGCAGCTAA

Library Parental gene expression (RPM)
bodymap2_liver 190 .66 RPM
bodymap2_lung 209 .11 RPM
bodymap2_breast 230 .96 RPM
bodymap2_adipose 38 .90 RPM
bodymap2_adrenal 78 .66 RPM
bodymap2_skeletal_muscle 1 .93 RPM
bodymap2_thyroid 29 .24 RPM
bodymap2_prostate 97 .53 RPM
bodymap2_colon 81 .81 RPM
bodymap2_testis 34 .11 RPM
bodymap2_brain 7 .83 RPM
bodymap2_heart 2 .88 RPM
bodymap2_white_blood_cells 0 .04 RPM
bodymap2_lymph_node 72 .40 RPM
bodymap2_ovary 81 .50 RPM
bodymap2_kidney 44 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010322 ortholog_one2one 5 retrogenes
retro_cjac_2100, retro_cjac_2706, retro_cjac_3874, retro_cjac_3904, retro_cjac_4141,
Gorilla gorilla ENSGGOG00000011158 ortholog_one2one 1 retrogene
retro_ggor_2984,
Macaca mulatta ENSMMUG00000005232 ortholog_one2one 4 retrogenes
retro_mmul_1555, retro_mmul_1993, retro_mmul_2378, retro_mmul_2554,
Nomascus leucogenys ENSNLEG00000001362 ortholog_one2one 18 retrogenes
retro_nleu_1108, retro_nleu_1744, retro_nleu_2079, retro_nleu_2944, retro_nleu_2978, retro_nleu_2999, retro_nleu_3000, retro_nleu_3001, retro_nleu_3034, retro_nleu_3036, retro_nleu_3067, retro_nleu_3071, retro_nleu_3072, retro_nleu_3076, retro_nleu_3089, retro_nleu_3092, retro_nleu_3119, retro_nleu_3128,
Pongo abelii ENSPPYG00000018166 ortholog_one2one 28 retrogenes
retro_pabe_1382, retro_pabe_1383, retro_pabe_1384, retro_pabe_1386, retro_pabe_1387, retro_pabe_1423, retro_pabe_1424, retro_pabe_1425, retro_pabe_1426, retro_pabe_2404, retro_pabe_2591, retro_pabe_2593, retro_pabe_2595, retro_pabe_2596, retro_pabe_2597, retro_pabe_2600, retro_pabe_2604, retro_pabe_2605, retro_pabe_2606, retro_pabe_2608, retro_pabe_3540, retro_pabe_3558, retro_pabe_3559, retro_pabe_3604, retro_pabe_3727, retro_pabe_638, retro_pabe_639, retro_pabe_666,
Pan troglodytes ENSPTRG00000019854 ortholog_one2one 10 retrogenes
retro_ptro_1095, retro_ptro_1096, retro_ptro_1097, retro_ptro_1098, retro_ptro_1099, retro_ptro_1100, retro_ptro_1795, retro_ptro_2942, retro_ptro_3067, retro_ptro_3188,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_743 56.04 54.60
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2. retro_hsap_1678 63.30 65.03
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3. retro_hsap_1679 65.96 56.44
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4. retro_hsap_1680 60.27 87.73
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5. retro_hsap_1681 60.98 98.16
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6. retro_hsap_1682 61.42 75.46
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7. retro_hsap_1683 58.75 97.55
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8. retro_hsap_2665 64.34 83.44
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9. retro_hsap_3134 56.04 54.60
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10. retro_hsap_4327 62.64 54.60
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11. retro_hsap_4330 64.34 83.44
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12. retro_hsap_4332 56.04 54.60
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13. retro_hsap_4792 59.24 95.71
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Download FASTA sequences of all ENSG00000106538 retrocopies