Parental gene:

RARRES2, ENSPPYG00000018166

Aliases:None
Description:Retinoic acid receptor responder protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R551]
Organism:Orangutan (Pongo abelii)
Coordinates:7:147945401..147950913(-)


>ENSPPYG00000018166
ATGCGACGGCTGCTGATTCCTCTGGCTCTGTGGCTGGGCGCGGTGGGCGTGGGCGTCGCCGAGCTCACGGAAGCCCAGCG
CCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTTCCAGGAGACCAGTGTGGAGA
GCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTTAAGCTCCAGCAGACAAGCTGCCGGAAGAGG
GACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGAGGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGA
GGACAAAGTTCTGGGCCGGTTGGTCCACTGCCCCATAGAGACCCAAGTTCTGCGGGAGCCTGAGGAGCACCAGGAGACCC
AGTGCATCAGGGTGCAGCGGGCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTG
CCCCGCAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 16 .81 RPM
SRP007412_cerebellum 8 .03 RPM
SRP007412_heart 7 .53 RPM
SRP007412_kidney 181 .38 RPM
SRP007412_liver 384 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010322 ortholog_one2one 5 retrogenes
retro_cjac_2100, retro_cjac_2706, retro_cjac_3874, retro_cjac_3904, retro_cjac_4141,
Homo sapiens ENSG00000106538 ortholog_one2one 13 retrogenes
retro_hsap_1678, retro_hsap_1679, retro_hsap_1680, retro_hsap_1681, retro_hsap_1682, retro_hsap_1683, retro_hsap_2665, retro_hsap_3134, retro_hsap_4327, retro_hsap_4330, retro_hsap_4332, retro_hsap_4792, retro_hsap_743,
Gorilla gorilla ENSGGOG00000011158 ortholog_one2one 1 retrogene
retro_ggor_2984,
Macaca mulatta ENSMMUG00000005232 ortholog_one2one 4 retrogenes
retro_mmul_1555, retro_mmul_1993, retro_mmul_2378, retro_mmul_2554,
Nomascus leucogenys ENSNLEG00000001362 ortholog_one2one 18 retrogenes
retro_nleu_1108, retro_nleu_1744, retro_nleu_2079, retro_nleu_2944, retro_nleu_2978, retro_nleu_2999, retro_nleu_3000, retro_nleu_3001, retro_nleu_3034, retro_nleu_3036, retro_nleu_3067, retro_nleu_3071, retro_nleu_3072, retro_nleu_3076, retro_nleu_3089, retro_nleu_3092, retro_nleu_3119, retro_nleu_3128,
Pan troglodytes ENSPTRG00000019854 ortholog_one2one 10 retrogenes
retro_ptro_1095, retro_ptro_1096, retro_ptro_1097, retro_ptro_1098, retro_ptro_1099, retro_ptro_1100, retro_ptro_1795, retro_ptro_2942, retro_ptro_3067, retro_ptro_3188,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_638 53.85 68.10
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2. retro_pabe_639 60.44 54.60
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3. retro_pabe_666 64.84 54.60
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4. retro_pabe_1382 67.19 75.46
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5. retro_pabe_1383 67.19 76.07
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6. retro_pabe_1384 66.67 74.85
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7. retro_pabe_1386 57.41 96.93
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8. retro_pabe_1387 57.47 51.53
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9. retro_pabe_1423 67.57 65.03
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10. retro_pabe_1424 67.19 75.46
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11. retro_pabe_1425 63.01 87.73
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12. retro_pabe_1426 61.59 98.16
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13. retro_pabe_2404 63.04 55.21
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14. retro_pabe_2591 62.64 54.60
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15. retro_pabe_2593 63.74 54.60
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16. retro_pabe_2595 64.57 75.46
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17. retro_pabe_2596 62.64 54.60
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18. retro_pabe_2597 61.54 54.60
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19. retro_pabe_2600 63.74 54.60
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20. retro_pabe_2604 61.54 54.60
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21. retro_pabe_2605 64.84 54.60
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22. retro_pabe_2606 63.74 54.60
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23. retro_pabe_2608 63.74 54.60
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24. retro_pabe_3540 68.54 53.37
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25. retro_pabe_3558 65.87 74.85
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26. retro_pabe_3559 63.53 50.92
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27. retro_pabe_3604 64.06 75.46
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28. retro_pabe_3727 59.49 96.32
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Download FASTA sequences of all ENSPPYG00000018166 retrocopies