Parental gene: | RARRES2, ENSPPYG00000018166 |
| Aliases: | None |
| Description: | Retinoic acid receptor responder protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5R551] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 7:147945401..147950913(-) |
>ENSPPYG00000018166
ATGCGACGGCTGCTGATTCCTCTGGCTCTGTGGCTGGGCGCGGTGGGCGTGGGCGTCGCCGAGCTCACGGAAGCCCAGCG
CCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTTCCAGGAGACCAGTGTGGAGA
GCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTTAAGCTCCAGCAGACAAGCTGCCGGAAGAGG
GACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGAGGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGA
GGACAAAGTTCTGGGCCGGTTGGTCCACTGCCCCATAGAGACCCAAGTTCTGCGGGAGCCTGAGGAGCACCAGGAGACCC
AGTGCATCAGGGTGCAGCGGGCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTG
CCCCGCAGCTGA
ATGCGACGGCTGCTGATTCCTCTGGCTCTGTGGCTGGGCGCGGTGGGCGTGGGCGTCGCCGAGCTCACGGAAGCCCAGCG
CCGGGGCCTGCAGGTGGCCCTGGAGGAATTTCACAAGCACCCGCCCGTGCAGTGGGCCTTCCAGGAGACCAGTGTGGAGA
GCGCCGTGGACACGCCCTTCCCAGCTGGAATATTTGTGAGGCTGGAATTTAAGCTCCAGCAGACAAGCTGCCGGAAGAGG
GACTGGAAGAAACCCGAGTGCAAAGTCAGGCCCAATGGGAGGAAACGGAAATGCCTGGCCTGCATCAAACTGGGCTCTGA
GGACAAAGTTCTGGGCCGGTTGGTCCACTGCCCCATAGAGACCCAAGTTCTGCGGGAGCCTGAGGAGCACCAGGAGACCC
AGTGCATCAGGGTGCAGCGGGCTGGTGAGGACCCCCACAGCTTCTACTTCCCTGGACAGTTCGCCTTCTCCAAGGCCCTG
CCCCGCAGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .81 RPM |
| SRP007412_cerebellum | 8 .03 RPM |
| SRP007412_heart | 7 .53 RPM |
| SRP007412_kidney | 181 .38 RPM |
| SRP007412_liver | 384 .91 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010322 | ortholog_one2one | 5 retrogenes | |
| Homo sapiens | ENSG00000106538 | ortholog_one2one | 13 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011158 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005232 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000001362 | ortholog_one2one | 18 retrogenes |
retro_nleu_1108, retro_nleu_1744, retro_nleu_2079, retro_nleu_2944, retro_nleu_2978, retro_nleu_2999, retro_nleu_3000, retro_nleu_3001, retro_nleu_3034, retro_nleu_3036, retro_nleu_3067, retro_nleu_3071, retro_nleu_3072, retro_nleu_3076, retro_nleu_3089, retro_nleu_3092, retro_nleu_3119, retro_nleu_3128,
|
| Pan troglodytes | ENSPTRG00000019854 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_638 | 53.85 | 68.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_639 | 60.44 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_666 | 64.84 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_1382 | 67.19 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_1383 | 67.19 | 76.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_1384 | 66.67 | 74.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_1386 | 57.41 | 96.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_1387 | 57.47 | 51.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_1423 | 67.57 | 65.03 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_pabe_1424 | 67.19 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_pabe_1425 | 63.01 | 87.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_pabe_1426 | 61.59 | 98.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_pabe_2404 | 63.04 | 55.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_pabe_2591 | 62.64 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_pabe_2593 | 63.74 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_pabe_2595 | 64.57 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_pabe_2596 | 62.64 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_pabe_2597 | 61.54 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_pabe_2600 | 63.74 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_pabe_2604 | 61.54 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_pabe_2605 | 64.84 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_pabe_2606 | 63.74 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_pabe_2608 | 63.74 | 54.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_pabe_3540 | 68.54 | 53.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_pabe_3558 | 65.87 | 74.85 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_pabe_3559 | 63.53 | 50.92 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_pabe_3604 | 64.06 | 75.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 28. | retro_pabe_3727 | 59.49 | 96.32 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000018166 retrocopies