Parental gene:

ENSTSYG00000010097

Aliases:None
Description:None
Organism:Tarsier (Tarsius syrichta)
Coordinates:scaffold_29478:7855..11202(+)


>ENSTSYG00000010097
ATGGCCGAGGAAGGCATCGCTGCTGGAGGTGTAATGGACGTGAACACAGCTTTACAAGAGGTGCTGAAGACCGCCCTCAT
CCACGACGGCCTAGCGCGTGGAATTCGCGAAGCCGCCAAAGCCTTAGACAAGCGCCAGGCCCATCTCTGTGTGCTTGCAT
CCAACTGTGATGAGCCTATGTACGTCAAGTTGGTGGAAGCCCTTTGTGCTGAACACCAAATCAATCTAATTAAGGTTGAT
GACAACAAGAAACTAGGGGAATGGGTAGGCCTGTGTAAAATCGACAGAGAGGGGAAACCCCGGAAAGTGGTTGGTTGCAG
TTGTGTAGTAGTTAAGGACTATGGCAAAGAATCTCAGGCCAAGGATGTCATCGAAGAGTACTTCAAATGCAAGAAATGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010479 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000008015 possible_ortholog 2 retrogenes
Bos taurus ENSBTAG00000001360 possible_ortholog 7 retrogenes
Canis familiaris ENSCAFG00000000190 ortholog_one2one 15 retrogenes
Callithrix jacchus ENSCJAG00000002865 ortholog_one2one 34 retrogenes
Cavia porcellus ENSCPOG00000000429 possible_ortholog 4 retrogenes
Dasypus novemcinctus ENSDNOG00000006214 possible_ortholog 31 retrogenes
Equus caballus ENSECAG00000001599 possible_ortholog 8 retrogenes
Echinops telfairi ENSETEG00000006854 possible_ortholog 14 retrogenes
Felis catus ENSFCAG00000028402 possible_ortholog 7 retrogenes
Homo sapiens ENSG00000112306 possible_ortholog 26 retrogenes
Gorilla gorilla ENSGGOG00000012234 possible_ortholog 22 retrogenes
Gadus morhua ENSGMOG00000019455 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000007933 possible_ortholog 11 retrogenes
Macropus eugenii ENSMEUG00000004285 possible_ortholog 1 retrogene
Microcebus murinus ENSMICG00000005252 possible_ortholog 5 retrogenes
Myotis lucifugus ENSMLUG00000001137 possible_ortholog 5 retrogenes
Macaca mulatta ENSMMUG00000013237 possible_ortholog 1 retrogene
Monodelphis domestica ENSMODG00000017520 possible_ortholog 1 retrogene
Mustela putorius furo ENSMPUG00000014771 possible_ortholog 1 retrogene
Mus musculus ENSMUSG00000061983 possible_ortholog 1 retrogene
Nomascus leucogenys ENSNLEG00000014611 possible_ortholog 4 retrogenes
Oryctolagus cuniculus ENSOCUG00000001606 possible_ortholog 14 retrogenes
Otolemur garnettii ENSOGAG00000001309 possible_ortholog 20 retrogenes
Pongo abelii ENSPPYG00000017020 ortholog_one2one 26 retrogenes
Pelodiscus sinensis ENSPSIG00000003457 ortholog_one2many 1 retrogene
Pan troglodytes ENSPTRG00000018618 possible_ortholog 25 retrogenes
Pteropus vampyrus ENSPVAG00000017201 possible_ortholog 12 retrogenes
Rattus norvegicus ENSRNOG00000016411 possible_ortholog 5 retrogenes
Sorex araneus ENSSARG00000003170 possible_ortholog 2 retrogenes
Sarcophilus harrisii ENSSHAG00000008905 ortholog_one2one 6 retrogenes
Sus scrofa ENSSSCG00000004177 ortholog_one2one 8 retrogenes
Tursiops truncatus ENSTTRG00000000609 possible_ortholog 11 retrogenes
Vicugna pacos ENSVPAG00000010082 possible_ortholog 4 retrogenes
Vicugna pacos ENSVPAG00000011504 possible_ortholog 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tsyr_99 90.72 72.73
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2. retro_tsyr_102 81.95 100.00
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3. retro_tsyr_129 85.82 100.00
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4. retro_tsyr_205 87.06 63.64
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5. retro_tsyr_249 60.24 62.12
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6. retro_tsyr_303 57.78 67.42
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7. retro_tsyr_419 74.02 96.21
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8. retro_tsyr_453 79.82 84.85
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9. retro_tsyr_556 59.52 62.12
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10. retro_tsyr_645 80.00 93.18
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11. retro_tsyr_733 62.07 64.39
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12. retro_tsyr_764 87.12 100.00
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13. retro_tsyr_801 83.56 54.55
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14. retro_tsyr_970 77.53 66.67
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15. retro_tsyr_1010 80.65 70.45
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16. retro_tsyr_1123 79.73 55.30
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17. retro_tsyr_1188 80.30 100.00
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18. retro_tsyr_1313 82.76 65.91
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19. retro_tsyr_1345 71.43 53.03
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20. retro_tsyr_1398 80.00 93.18
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21. retro_tsyr_1486 71.43 53.03
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22. retro_tsyr_1668 92.25 97.73
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23. retro_tsyr_1955 83.58 100.00
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24. retro_tsyr_1993 95.35 65.15
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Download FASTA sequences of all ENSTSYG00000010097 retrocopies