RetrogeneDB ID: | retro_chof_2455 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_77476:5520..6204(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSCHOG00000004622 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 93.86 % |
Parental protein coverage: | 91.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTH |
MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTH | |
Retrocopy | MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTH |
Parental | GRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASR |
G.VRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASR | |
Retrocopy | GHVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASR |
Parental | -RKL--LSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYA |
.RK...LSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQ.TKKNKEEAAEYA | |
Retrocopy | IRKFFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQHTKKNKEEAAEYA |
Parental | KLLAKRMKEAKEKRQEQI |
KLLAKRMKEA........ | |
Retrocopy | KLLAKRMKEARNRLPREV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |