RetrogeneDB ID: | retro_nleu_2611 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397381.1:4145448..4145847(+) | ||
Located in intron of: | ENSNLEG00000012871 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSNLEG00000017532 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1S6Z0] |
Percent Identity: | 86.47 % |
Parental protein coverage: | 53.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQ |
GEKDIPGLTDT.V.RRLGP.R.SRIRK.FNLSKEDDV.QYVVRKPLNKEGKKPRTKAPKIQ.LVTP.VLQ | |
Retrocopy | GEKDIPGLTDTMVLRRLGPNRTSRIRKFFNLSKEDDVCQYVVRKPLNKEGKKPRTKAPKIQHLVTPHVLQ |
Parental | HKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK |
HK..RIALKKQ..KKNKEEAAEYAKLLAKRMKEAKEK.Q.QI.KR.R.SSL.ASTSKSESSQK | |
Retrocopy | HKQQRIALKKQHIKKNKEEAAEYAKLLAKRMKEAKEKHQGQIVKRHRPSSLQASTSKSESSQK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |