RetrogeneDB ID: | retro_mluc_1146 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429799:5521099..5521605(+) | ||
Located in intron of: | ENSMLUG00000014137 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSMLUG00000007588 | ||
Aliases: | None | ||
Description: | 40S ribosomal protein S6 [Source:UniProtKB/TrEMBL;Acc:G1P9K5] |
Percent Identity: | 66.09 % |
Parental protein coverage: | 68.27 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | LLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLN-LVIVKKGEK-DIPGLTDTTVPRRL-GPKRASRI |
LLL.KGHSCYRPR.TGERK.KSV..CIVDA.LSV.N.LV..K.G.K.DI.GL.DTTVP..L.GP...... | |
Retrocopy | LLLGKGHSCYRPRWTGERKCKSVQDCIVDADLSVFNVLVV*KRGRK<DISGLIDTTVPQCL>GPRELTES |
Parental | RKLFNLSKEDDVRKYVVRKPLNKEGK-KPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYA |
......SKED.V..YV.RKPL.K.....P.TKAPKIQRLVTPRVLQHKR..IALKKQ.T..N..EA.EY. | |
Retrocopy | ANS-SISKEDYVCQYVLRKPLYKDSR<EPQTKAPKIQRLVTPRVLQHKRC-IALKKQCTA*NEKEAKEYV |
Parental | KLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKS |
KL.AKRMKE.KEK.QEQIA.R..LSSL..STS.S | |
Retrocopy | KLFAKRMKEVKEKCQEQIAMRHKLSSLKVSTSES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |