RetrogeneDB ID: | retro_ogar_1222 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873539.1:2674290..2674690(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSOGAG00000016254 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 79.1 % |
Parental protein coverage: | 53.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | GEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRK-PLNKEGKKPRTKAPKIQRLVTPRVL |
GEK.IPG..DT.VP..LGPKR.S.I.KLF.LSKEDDV.QY.VRK.PLNKEGKKPRT.APKI..LVTP.VL | |
Retrocopy | GEKNIPGVNDTMVPQCLGPKRVSKICKLFRLSKEDDVCQYLVRK>PLNKEGKKPRTRAPKIWHLVTPHVL |
Parental | QHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKSESSQK |
QHK..RIALKKQ.TKKNKEEAA.YAKLLAKRMKEAKEK.Q.QIAKR.RLSSLR.STSKSE...K | |
Retrocopy | QHKCWRIALKKQCTKKNKEEAAVYAKLLAKRMKEAKEKCQVQIAKRHRLSSLRDSTSKSECRYK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |