RetrogeneDB ID: | retro_ttru_587 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_2785:529622..530339(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS6 | ||
Ensembl ID: | ENSTTRG00000001787 | ||
Aliases: | None | ||
Description: | ribosomal protein S6 [Source:HGNC Symbol;Acc:10429] |
Percent Identity: | 69.26 % |
Parental protein coverage: | 98.39 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTH |
MKLNISF.ATGCQKLIEVDDERKLRTFYEKRMATEVAAD.LGEE.KGYVVRISGGNDKQGFPMKQGVLTH | |
Retrocopy | MKLNISFLATGCQKLIEVDDERKLRTFYEKRMATEVAADVLGEERKGYVVRISGGNDKQGFPMKQGVLTH |
Parental | GRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASR |
G.VRLLLSKGHSCYRPRRTGERK.KSV..CIVDANLS.LNLV.VKKGEKDIPGLTDTTVPR.LGPK.ASR | |
Retrocopy | GQVRLLLSKGHSCYRPRRTGERKHKSVWCCIVDANLSILNLVTVKKGEKDIPGLTDTTVPRHLGPKKASR |
Parental | IRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYA |
I.KLFNLSKE...R............K.P........R......L.H........K.......E.A...A | |
Retrocopy | IHKLFNLSKECVLRKPLNKEGKKPRTKAPKIQRLVTPRVLQHK-LWHIALKKQRTKKNKEEASEYANLLA |
Parental | KLLAKRMKEAKEKRQEQIAKRRRLSSLRASTSKS |
K...K....AK.K.QEQ.AKR.RLSSLRAS.S.S | |
Retrocopy | KRMKK----AK*KGQEQNAKRQRLSSLRASPSES |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |