Parental gene:

RPS6, ENSTTRG00000001787

Aliases:None
Description:ribosomal protein S6 [Source:HGNC Symbol;Acc:10429]
Organism:Dolphin (Tursiops truncatus)
Coordinates:GeneScaffold_2915:852639..857122(-)


>ENSTTRG00000001787
ATGAAGCTGAACATCTCTTTCCCGGCCACTGGCTGCCAGAAACTCATTGAAGTGGACGATGAACGAAAACTTCGAACCTT
TTATGAGAAGCGTATGGCCACAGAAGTTGCTGCTGACGCTCTGGGTGAAGAATGGAAGGGTTATGTGGTCCGAATCAGTG
GTGGGAACGACAAACAGGGTTTCCCCATGAAGCAGGGTGTCTTGACCCATGGGCGAGTCCGCCTGCTACTGAGTAAGGGG
CATTCCTGTTACAGACCAAGGAGGACTGGAGAAAGAAAGCGCAAATCTGTACGGGGCTGCATTGTGGATGCCAATCTGAG
CGTTCTCAATTTGGTCATTGTAAAAAAAGGGGAGAAGGATATTCCTGGACTCACTGATACTACTGTGCCTCGTCGCCTGG
GGCCCAAAAGAGCTAGCAGAATCCGCAAACTTTTCAATCTCTCTAAAGAAGATGATGTCCGCCAGTATGTTGTGAGAAAG
CCCCTAAACAAAGAAGGTAAGAAACCTAGGACCAAAGCACCCAAGATTCAGCGTCTTGTTACTCCACGTGTTCTGCAACA
CAAACGTCGGCGAATTGCTCTGAAGAAACAGCGTACTAAGAAAAATAAGGAAGAGGCTGCAGAATATGCTAAACTTTTGG
CCAAGAGAATGAAGGAGGCCAAAGAAAAACGCCAGGAACAGATTGCCAAGAGACGGAGGCTGTCCTCTCTGAGAGCTTCT
ACTTCTAAGTCTGAGTCCAGTAAATGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000017634 possible_ortholog 1 retrogene
retro_acar_20,
Choloepus hoffmanni ENSCHOG00000004622 ortholog_one2one 15 retrogenes
retro_chof_1018, retro_chof_1101, retro_chof_1107, retro_chof_1590, retro_chof_193, retro_chof_2036, retro_chof_2037, retro_chof_2051, retro_chof_2188, retro_chof_2363, retro_chof_2455, retro_chof_2486, retro_chof_2608, retro_chof_849, retro_chof_941,
Cavia porcellus ENSCPOG00000003750 possible_ortholog 4 retrogenes
retro_cpor_1244, retro_cpor_22, retro_cpor_317, retro_cpor_486,
Dipodomys ordii ENSDORG00000012057 ortholog_one2one 2 retrogenes
retro_dord_37, retro_dord_452,
Loxodonta africana ENSLAFG00000010766 possible_ortholog 4 retrogenes
retro_lafr_1021, retro_lafr_1239, retro_lafr_59, retro_lafr_667,
Myotis lucifugus ENSMLUG00000007588 ortholog_one2one 27 retrogenes
retro_mluc_1041, retro_mluc_1146, retro_mluc_1169, retro_mluc_1393, retro_mluc_1411, retro_mluc_1448, retro_mluc_1472, retro_mluc_1532, retro_mluc_1566, retro_mluc_1593, retro_mluc_1629, retro_mluc_1635, retro_mluc_1723, retro_mluc_1799, retro_mluc_1909, retro_mluc_1928, retro_mluc_1933, retro_mluc_2110, retro_mluc_2129, retro_mluc_490, retro_mluc_493, retro_mluc_514, retro_mluc_557, retro_mluc_652, retro_mluc_678, retro_mluc_722, retro_mluc_830,
Monodelphis domestica ENSMODG00000004095 possible_ortholog 1 retrogene
retro_mdom_301,
Nomascus leucogenys ENSNLEG00000017532 ortholog_one2one 14 retrogenes
retro_nleu_1033, retro_nleu_1333, retro_nleu_1613, retro_nleu_226, retro_nleu_2471, retro_nleu_252, retro_nleu_2536, retro_nleu_2611, retro_nleu_2652, retro_nleu_2655, retro_nleu_2860, retro_nleu_313, retro_nleu_476, retro_nleu_546,
Otolemur garnettii ENSOGAG00000016254 ortholog_one2one 21 retrogenes
retro_ogar_1208, retro_ogar_1222, retro_ogar_1335, retro_ogar_1356, retro_ogar_1359, retro_ogar_1439, retro_ogar_1526, retro_ogar_1531, retro_ogar_1612, retro_ogar_1979, retro_ogar_2174, retro_ogar_2195, retro_ogar_2248, retro_ogar_2264, retro_ogar_2514, retro_ogar_2707, retro_ogar_2853, retro_ogar_3329, retro_ogar_462, retro_ogar_575, retro_ogar_782,
Ochotona princeps ENSOPRG00000012290 possible_ortholog 5 retrogenes
retro_opri_123, retro_opri_642, retro_opri_78, retro_opri_862, retro_opri_895,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ttru_107 70.45 70.56
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ttru_370 86.29 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ttru_468 87.10 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_ttru_587 69.26 98.39
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_ttru_748 73.85 51.61
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_ttru_786 96.89 77.82
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_ttru_878 86.09 60.89
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_ttru_905 87.17 91.13
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_ttru_934 91.91 54.44
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_ttru_1024 77.62 56.85
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_ttru_1275 71.81 59.27
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSTTRG00000001787 retrocopies